Rufibacter radiotolerans: TH63_08480
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Entry
TH63_08480 CDS
T03996
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ruf
Rufibacter radiotolerans
Brite
KEGG Orthology (KO) [BR:
ruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ruf03032
]
TH63_08480
03400 DNA repair and recombination proteins [BR:
ruf03400
]
TH63_08480
Enzymes [BR:
ruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TH63_08480
DNA replication proteins [BR:
ruf03032
]
Prokaryotic type
DNA Topoisomerases
TH63_08480
DNA repair and recombination proteins [BR:
ruf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TH63_08480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
EAP30
Motif
Other DBs
NCBI-ProteinID:
AKQ47567
UniProt:
A0A0H4VUI8
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All DBs
Position
2031885..2034344
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AA seq
819 aa
AA seq
DB search
MIKNLVIVESPAKAKTIEGYLGKDFIVKSSFGHVRDLPKDNNAIDIQNGFKPTYVVNADK
REVVSQLKKLAKEAEVVWLASDEDREGEAISWHLSEALNLNESKTRRIVFREITKNAILN
AIEHPRAIDVNLVNAQQARRVLDRLVGFELSPVLWKKIKTGLSAGRVQSVAVRLVVERER
EIERHKAVATFKIVAQFDAGGKRMEAELNTRFKTQAEAEDFLQRCIGAAYAIESLEKKPT
KRSPAPPFTTSTLQQEASRKLSFSVAQTMQVAQRLYEAGKISYMRTDSVNLSQEAQTAAA
VEIARIFGENYVKTRQYKTKSKQAQEAHESIRPTDFAAVQASTDRNEQRLYDLIRKRAIA
SQMADAEIEKTTATITISGQPEKLIATGEVIRFEGFLKVYTESTDDEELADDDVKGMLPP
LQEGQALNLQRMQATERYSRPAPRYTEASLVKKLEEMGIGRPSTFAPTISTIQKRGYVEK
DNREGKERAYTVLTLEKDQISAQKKTEMAGAEKAKLFPTDIAMVVTDFLVSHFESVIDYS
FTAKVEEEFDEIASGKKQWDKMLENFYGSFHKTIEDSASVERSTVSGARELGIDPVTGKK
VITKLGRFGPYVQLGEEEEGSEVKPAYASLRKGTFIESITLEQALELFKLPRVVGEFEGK
DMKAAIGRFGPYIQHNSKFYSLPKDLDPLLVTEEEAVALIEAKRKSDAEKLIKSFPENEE
VTVLNGRFGPYIVVGKKNVKIPKGQEPAELTLEQCLELAAATPDKPARGGFKKKAAAPSA
DAPAAKKAPAKKAPAKKTAAKKATGTATKKATTAKKKAS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaacttagtaattgtggagtcaccggccaaggccaagaccattgaagggtac
ctgggcaaggattttatcgttaaatccagcttcgggcacgtgcgtgacctccccaaagac
aacaatgccatagatatccagaatgggttcaaacccacctacgtggtgaacgccgacaag
cgggaggtagtgtctcagttgaaaaaactggccaaggaagcggaagtggtatggctggca
tcagatgaggaccgtgagggagaggcaatttcctggcacctgtctgaggccctaaacctt
aatgagtcaaaaacgcgccgaatagttttccgggagattaccaagaacgccattttaaat
gccattgagcacccccgcgccatagacgtgaacctggtgaacgcccaacaggctcgccgc
gtacttgataggctggtagggtttgagttgtctccggtgctctggaaaaaaataaagacc
ggcctttccgccggaagggtacagtctgtggcggtacgcctggtggtggaacgggaacgg
gagattgagcgccataaagcggtggccacctttaaaatagtggcccagtttgatgccggc
ggaaagcgcatggaagccgaactgaacacccgcttcaaaacgcaggccgaagcggaggat
ttcctgcagcgctgcattggtgccgcttatgccattgaaagcttggagaaaaagcccact
aaacgcagccccgcgccgccttttaccacctctaccctgcagcaggaagccagccgtaag
ctctctttctctgtagcgcaaaccatgcaggtggctcagcggttgtatgaggccggtaag
atctcctacatgcgtaccgactcggtgaacctgtcacaggaagcccagaccgccgccgcc
gtagagattgcccgcatctttggagaaaactacgttaagacccgccaatataaaaccaag
tccaagcaagcccaggaagcccacgaatccatcagacccacggactttgctgccgtgcag
gcaagcactgaccgtaacgagcagcgtctttatgatttgatccggaaacgcgccattgcc
tcgcagatggccgatgccgagattgagaaaaccactgccaccatcactatctctggccag
ccggagaaactgatcgccaccggcgaagtgatccggtttgagggtttcctgaaggtgtac
actgagtctaccgacgatgaggaattggcggatgatgacgtgaaaggcatgttgcctccg
ttacaggaaggccaggctctgaacctgcagcgcatgcaggccaccgagcgttacagccgc
ccggccccccgttacacagaagccagcctggtgaagaaactggaagagatgggcattggc
cgtccgtctacctttgcccctaccatctccactatccagaaacgcgggtacgtagaaaaa
gacaatagagaaggaaaggaacgcgcctataccgtactaaccctggagaaagaccagatc
tcggcgcaaaagaaaaccgagatggccggcgccgaaaaagccaagctcttccctacggat
attgccatggtggtaaccgacttcctggtgtcccattttgaaagcgtgattgactattcc
ttcaccgccaaagtagaggaagagtttgatgaaattgcctcgggtaaaaaacagtgggac
aaaatgttagagaacttctacggaagctttcataaaaccattgaagacagcgcctcggtg
gaacggtctaccgtaagcggggctcgcgaattagggattgacccggtgacaggaaagaag
gtcatcaccaaattaggtcgctttggtccttatgtacagttaggcgaggaagaggaagga
tctgaggttaaaccagcatacgccagcctacggaaagggacctttattgagtctattacc
ctggagcaggccttggaattgttcaaactgccccgcgtggtgggtgagtttgaaggcaag
gacatgaaagccgcaattggtcggttcggcccttatattcagcacaacagcaagttctac
tctctacccaaggacttggacccactgctggtaacggaagaagaagcggtggccttgatt
gaagccaagcgcaaatccgatgccgagaaactgatcaagtctttccctgaaaatgaggag
gtaacagtgttgaacggacgctttgggccttacattgtggtaggcaagaagaacgtgaaa
atcccgaaaggccaggagcccgctgagttgaccctggagcaatgcctggaactggccgcc
gccaccccagataaaccagcccgcggaggcttcaaaaagaaagccgccgctccttccgct
gacgcgccggcagccaaaaaggccccggccaaaaaagcgcccgctaaaaagactgcggcc
aaaaaggccaccggcaccgctactaaaaaggctaccaccgccaaaaagaaagcaagctag
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