Rufibacter radiotolerans: TH63_09575
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Entry
TH63_09575 CDS
T03996
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ruf
Rufibacter radiotolerans
Pathway
ruf00300
Lysine biosynthesis
ruf00470
D-Amino acid metabolism
ruf01100
Metabolic pathways
ruf01110
Biosynthesis of secondary metabolites
ruf01120
Microbial metabolism in diverse environments
ruf01230
Biosynthesis of amino acids
Module
ruf_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ruf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TH63_09575
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TH63_09575
Enzymes [BR:
ruf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
TH63_09575
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
CRF
TssR_VWA
Motif
Other DBs
NCBI-ProteinID:
AKQ45835
UniProt:
A0A0H4VJ41
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All DBs
Position
2293135..2294280
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AA seq
381 aa
AA seq
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MLKEQLSVFEQHTTPFYAYDLGLLRQTLDLARAEASKYGYHVHYALKANANAPILAEVLE
RGFGADCVSGNEVRRALEAGFGPEQVVFAGVGKSDAEINFALQSNIFCFNCESVQELEVI
QELAATQGKTAQVALRINPNVDAYTHKYITTGLEENKFGINVWELEGLVLRFAEWPNLRL
IGLHFHIGSQITDLRAFENLCVRVNEIQRWFEDRGLVFPHLNVGGGLGVDYRAPEENPIA
DFAAYFKIFDLLLEKRPGQQVHFELGRALVAPSGNLISKVLYLKHGQKTNFVILDAGMTE
LMRPALYQAYHKIENLSSDLPEKTYDVVGPICESTDCFAKGYILPETKRGDLVAIRTAGA
YGEVMVSEYNLRDKVKAIYLS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaggagcaactttcggtatttgagcaacacaccacccctttctatgcctatgat
cttggtttactgcgccagaccttagatttggcgcgcgccgaggccagcaaatacggatac
cacgtgcactacgcccttaaggccaacgccaacgcccctattctggccgaggtgcttgaa
agagggttcggggctgattgcgtaagcgggaatgaagtgcgccgggcgctggaagccggt
tttggcccggagcaagtggtctttgccggcgtagggaaatctgacgctgaaatcaacttc
gccctgcagtccaacatattctgcttcaactgtgaatctgtgcaggagttggaggtgatt
caggaactggcggccacccagggaaaaacagcccaggtggcgcttcgcataaacccaaac
gtagacgcctacacccacaaatacattaccaccggcctggaggaaaacaagttcgggatt
aatgtatgggaactggaaggactggtgctccgcttcgcggaatggcctaaccttagattg
attgggttgcacttccatattggctcccaaatcactgacttgcgggcctttgaaaacctg
tgcgtgcgggtgaatgaaatccagcgctggtttgaggaccgcggtttggtattcccgcac
ctgaacgtaggcggcggactgggcgtggattaccgcgccccagaggagaaccctattgcg
gactttgcggcctatttcaagatctttgatctgttactggagaaacgccctggacagcag
gttcattttgagctaggaagagccttggtggcccccagcggaaacctcatctccaaagta
ctgtacctgaaacacggtcagaaaaccaacttcgtgatactggatgcgggtatgactgaa
cttatgcgccccgccttgtaccaggcgtaccataaaatagaaaacctcagcagcgatttg
ccagagaaaacctatgacgtggtaggtcccatctgcgagtcaacggactgtttcgccaag
ggttatatcctgcccgaaaccaaacgaggagacctggttgccatccggactgccggtgcg
tacggggaagtgatggtttcagaatacaacctacgggataaggtgaaagctatttattta
tcataa
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