Rufibacter radiotolerans: TH63_11430
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Entry
TH63_11430 CDS
T03996
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ruf
Rufibacter radiotolerans
Pathway
ruf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TH63_11430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ruf03400
]
TH63_11430
Enzymes [BR:
ruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TH63_11430
DNA repair and recombination proteins [BR:
ruf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TH63_11430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
WHD_PriA_bact
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
HTH_65
Cas3-like_C_2
nSTAND3
AAA_30
nSTAND6
Zn_ribbon_6
nSTAND_NTPase5
AAA_19
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AKQ46102
UniProt:
A0A0H4VQB0
LinkDB
All DBs
Position
2743106..2745640
Genome browser
AA seq
844 aa
AA seq
DB search
MTPELEFHIPTDDVHERVTLFADVILPLPLPKLYTYRVPYQMSEEVMVGARVLVQFGSKK
VLSCVVARVHETPPKDYQAKYLLEVIDEKPVVTEPQLKLFQWMAEYYMCTLGEVINAALP
SALKLSSESQIQLHPQFNDETNEWPLTAHEENIIFALRQKQSLTFTEVGQLLQLTSFHKI
IKSLLLKDVIIIYEEIAEKYAPKVVKKVRLTSAYTTSEETLEELFNQLASKPKQLDVLLK
YVQLSPILQNLRTNEEGIEKNLLTSNPHLSLSAINTLLKHGIMEQFDVVVSRFPMAEGRG
PYLSSDLSPAQAAARDAVLETFGEKDTVLLHGITGSGKTEIYMDLIQKAVEAGGQVLYLL
PEIALTTQIVTRLKRVFGDRLGVYHSKFSDNERVEVWNGILSGRFQVVVGVRSSVFLPFH
SLSLLIVDEEHEPSYKQHDPAPRYNAREVALMMAHFHQAKTLLGSATPSVETYYHCQSGK
WGLVNLLERYGEATLPLVELVDVRQEGLRKNMLSHFSQKLVHAIEDTLHRHEQVILFQNR
RGYAPFIDCNDCAWIPKCRNCAVSLSYHKFSNELRCHYCGYTERKPNDCPACGSTMLKTV
GFGTEKIEDELKLILPQSRIQRMDLDTTKRKNSHQQIIEDFEMQRTDILVGTQMVTKGLD
FEHVSLVGILSADSIIHFPDFRAHERAFQLFVQVSGRAGRKGKNGKVLIQTANPNQPIFQ
RVIDNDYQGLYQQEIAERQKFRYPPFVRMIRMTIKHPEARPCEQAAILLAKDLNDRLGRG
GVLGPEAPHIFKIRNQFLQEIHVKLDRESGHLKHSKNQILEAVQALLQNKEFKQLRVVID
VDPS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
ttgactcccgaattagaattccatattcctacagatgacgtccacgaacgggttaccttg
ttcgcggacgtcattttacctttgccccttcctaaactgtatacctaccgcgtcccttac
cagatgagtgaggaggtgatggtgggtgcccgcgtgctggtgcagttcggttctaaaaag
gtcttgagctgcgtggtggcgcgggtgcatgagacgcctcccaaagattaccaggccaaa
tacctgttggaggtcattgacgagaagccggtagtcactgagccccagttgaagctgttc
caatggatggccgagtactacatgtgcacgctgggcgaggtgatcaacgccgccctgccc
tcggccctcaagctcagcagcgagtcccagattcagctgcacccccaattcaacgacgaa
accaacgagtggccccttacggcgcatgaggaaaacatcatcttcgcgctgcggcaaaag
cagagtcttacgttcacggaggtaggccagcttctgcagcttaccagtttccataagatt
attaaatcattgctcctcaaggatgttatcatcatctatgaggagatagccgaaaaatat
gcccccaaggtggtgaagaaagtacgattaacttcggcttacaccaccagtgaggaaacc
ctggaggagcttttcaaccagctggcttccaaacccaagcaactggacgtgctgctcaaa
tacgtgcaactctcccctatcctgcagaacctgagaaccaatgaagaaggcatagagaag
aacctgcttacctccaatccgcacctgtcgctttcggccatcaataccttgctcaagcat
ggcattatggagcaatttgacgtggtggtaagccgtttccctatggccgaaggccgcggc
ccttacctaagctcggacctttcccccgcccaggctgccgcccgcgatgcggtgctggaa
acctttggggagaaagacacggtgctgctgcacggcattaccggcagcggcaagaccgag
atctacatggacctgatccagaaggccgtggaagccggcggacaggtgttgtacttattg
cccgagattgcccttaccacccagattgtcacgcgcctgaaacgggtgtttggcgaccgg
ttgggcgtgtaccattccaaattctcagacaacgagcgcgtggaagtctggaacgggatc
ctttcgggccggttccaggtggtggtgggtgtacggtcttctgtatttctgcctttccac
tctttgtctttgttgattgtagacgaggagcacgagccttcttacaagcagcatgacccc
gccccgcgctacaacgcccgcgaagtggccctcatgatggcgcatttccatcaggcgaag
actttgctaggttcggccacgccctccgtggaaacctattaccactgccaaagcgggaag
tggggactggtgaacctgctggagcgctacggcgaagccacgctacctttggtagaactg
gtagacgtgcggcaggaaggcctgcgcaagaacatgctcagccatttctcccagaaactg
gtgcacgccattgaagacaccctgcaccgccatgagcaggtgatcctgttccagaaccgg
cggggctatgctcccttcattgactgcaatgactgcgcctggattcctaagtgccgtaac
tgcgcagtgagtctctcttaccataaattttccaatgagctgcggtgccactattgcggt
tacaccgaacgcaaacccaacgactgccccgcctgcggctccaccatgcttaaaaccgtg
ggctttggcaccgagaagattgaagacgaactcaagctgattttgccccagtcccgcatt
cagcgcatggacctggacaccaccaagcgcaaaaacagccaccagcagatcatagaagac
tttgagatgcagcgcaccgatattctggtgggcacccagatggtgaccaagggcctggac
tttgagcatgtgagcctggtaggtatcctgagtgccgacagcattatccatttcccggac
ttcagggcccatgagcgtgcgttccaattgtttgtgcaggtaagtggccgcgccggccgg
aaaggtaagaatggcaaggtgctcatccagacggccaaccccaaccagcccatcttccag
cgggtcattgacaacgattatcagggcctctaccagcaggaaattgccgaacgccagaaa
ttcagatatccgcctttcgtgcgcatgatccggatgacgatcaagcaccccgaggcgaga
ccctgcgaacaagcggctatcctcctcgccaaagacctcaacgaccggttaggccgtgga
ggcgtgcttggcccggaagccccgcacatcttcaaaatcagaaaccagttcctacaagag
atccacgtgaaattagaccgtgaaagcggccacctaaagcattccaaaaatcagattctg
gaggcagtacaggctttgctccagaacaaggagtttaagcaactgcgggtggttattgat
gtagacccgtcgtaa
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