Rufibacter radiotolerans: TH63_16870
Help
Entry
TH63_16870 CDS
T03996
Name
(GenBank) Vi polysaccharide biosynthesis protein VipB/TviC
KO
K02473
UDP-N-acetylglucosamine/UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase [EC:
5.1.3.7
5.1.3.45
]
Organism
ruf
Rufibacter radiotolerans
Pathway
ruf00520
Amino sugar and nucleotide sugar metabolism
ruf00541
Biosynthesis of various nucleotide sugars
ruf01100
Metabolic pathways
ruf01250
Biosynthesis of nucleotide sugars
Module
ruf_M01036
UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
Brite
KEGG Orthology (KO) [BR:
ruf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
TH63_16870
00541 Biosynthesis of various nucleotide sugars
TH63_16870
Enzymes [BR:
ruf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.7 UDP-N-acetylglucosamine 4-epimerase
TH63_16870
5.1.3.45 UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase
TH63_16870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_10
NAD_binding_4
NmrA
RmlD_sub_bind
adh_short
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AKQ46928
UniProt:
A0A0H4VNP2
LinkDB
All DBs
Position
complement(4152671..4153678)
Genome browser
AA seq
335 aa
AA seq
DB search
MYSSPFHTGSLENTSFLVTGGAGFIGSNLVEYLLKYNAKKVRVLDNFSNGFHKNLKAFQG
NDRLEVMDGDIRDMEACMKACEGMDVVLHQAALGSVPRSVKDPVTSNEVNVGGFVNMLMA
TKEQKVKRFVYAASSSTYGDSKSLPKVEDKIGKPLSPYAVTKYANELYADVFGKTYGMEI
IGLRYFNIFGPRQDPNGAYAAVIPLFIDAVLNGKSPRMNGDGGQTRDFTFVENCVEANIR
AAMVTNPDAINQVYNIAVGDRTSLNDLFNILKEEAGVDITPEYGPERAGDIRDSLADITK
ARTLLGYNPQIRIQEGLQKTLAWFKENQDFIYNQK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtattcatcacccttccataccggttccttagaaaatacctcatttttggtgacaggc
ggcgctggctttattggctctaacctggtagaatatctgcttaagtacaacgccaagaaa
gtcagagtgctggataacttttccaacggattccacaagaacctgaaagccttccagggc
aatgacaggctggaagttatggatggcgatatccgggatatggaggcgtgcatgaaggcc
tgcgaaggcatggatgtggtgttgcatcaggcagctttaggttcagtacccagaagcgtg
aaagacccggttacttccaatgaggtcaacgtgggtggtttcgtgaacatgctcatggcc
actaaggagcagaaggtgaagcgttttgtgtacgctgcttcttcgtctacctacggcgat
agtaaatcccttcctaaggtggaagataagattggtaagccgctgtctccttatgcggtg
accaaatatgccaatgagttgtatgccgatgtgttcgggaaaacctatggcatggagatc
atcgggctgcggtacttcaatatcttcgggccccgacaggatcctaacggggcgtacgcg
gctgtaattccattgtttattgatgcggttctgaatggaaagtctcctagaatgaacgga
gacggcggccaaacccgtgactttacttttgtggaaaactgcgtggaagcgaacatccgg
gcggcaatggtgacgaaccctgatgccatcaaccaggtgtataacattgcggtaggcgac
agaacttccttaaacgatctgttcaacatcctgaaagaagaggccggagtggacatcacc
ccggagtacggaccagaacgggccggagacatcagagacagtttagccgatatcaccaag
gcgcggaccttgctgggctacaatccgcagatcaggatccaggaaggcttgcagaaaacc
cttgcttggtttaaggaaaaccaggactttatctacaaccaaaaataa
DBGET
integrated database retrieval system