Rufibacter radiotolerans: TH63_17565
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Entry
TH63_17565 CDS
T03996
Name
(GenBank) hypothetical protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ruf
Rufibacter radiotolerans
Brite
KEGG Orthology (KO) [BR:
ruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ruf03009
]
TH63_17565
Enzymes [BR:
ruf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
TH63_17565
Ribosome biogenesis [BR:
ruf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TH63_17565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
AKQ47038
UniProt:
A0A0H4VNZ8
LinkDB
All DBs
Position
complement(4316789..4318597)
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AA seq
602 aa
AA seq
DB search
MARNEDTPQEGNDRARDNSRGGERKVFGRGTRFDRPAPGDREGGFRNRERKPENTDRPAG
DRAERPRREDAPDGEVNTRREDRERAPRRENDRRGGDFRPARGFERPDRGNDRGADRPRG
GADRPDRSDRPAREGGFNPSEGRDSRGSGGSYQDRREGGSRPTRGGEERGGERRSFGNRD
DRGGERRSGDRPAFGAGREDSRGARSGDRPDRGGFRKEGFSSDRPDRGAGRGGDDRRERT
GDREGGSFNRRDDRRSDAPRENRPFSGNRDETSGERPARREGDRPFDRSAPRENRGREDR
SSSFQRRDDRPERAHSRPERSDRPDRDSKGFKEGRFGRSDEETQEAPAYNLRRYEERQKK
KKPEGASDELRLNRYIANAGICSRREADELIAAGEIKVNGEVVTEMGYKVAPSDTVQYGR
KTLSREKTVYVLLNKPKDFLTTTDDPEGRKTVMDLIKNASKERLFPVGRLDRNTTGLLLF
TNDGELAQKLTHPSNKVSKIYQVELDKPITQEHLKQIQEGVELEDGKAIVDDLGLLGDSN
KFLGLEIHIGRNRIVRRIFEHLGYDVVTLDRVQYAGLTKKDLPRGNWRFLSEKEVVRLKY
FM
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggctagaaacgaagatacgcctcaagaaggcaacgaccgcgcacgtgataactcccgc
ggcggcgaaagaaaagtatttggcagaggcacccgctttgaccgccctgcccccggagac
cgtgaaggcggcttccggaacagagaaagaaaaccagaaaatacagacagacccgcaggt
gaccgtgccgaaagaccacgccgcgaagatgcgcctgacggcgaagtaaacacccgccgc
gaagaccgcgagcgcgctcccagaagagaaaacgaccgccgaggcggcgacttccgtccg
gcccgcggctttgaaagaccagaccgcggcaatgaccgtggtgcagacagaccccgtggc
ggcgctgaccgcccagaccgttctgaccgtccggccagagaaggcggctttaacccttca
gaaggcagagatagccgcggcagcggaggttcttaccaggaccgccgtgaaggtggtagc
cgcccaacccgcggaggtgaggaaagaggcggcgaacgccgttcttttggcaaccgcgat
gaccgtggcggcgagcgccgctctggcgaccgtcccgcttttggtgccggccgtgaagac
agccgtggcgcccgtagcggtgaccgccccgaccggggtggtttcagaaaagaaggcttc
tcctctgaccgcccagaccgtggcgcaggccgcggcggcgatgaccgcagagaaagaacc
ggcgacagagaaggaggcagctttaaccgccgcgatgaccggcgcagtgacgctccccgc
gaaaacaggccgttttctggaaacagagacgaaaccagcggagaacgcccggcccgcaga
gaaggcgacagaccttttgaccgcagcgccccgcgtgagaaccgtggccgtgaggaccgt
tcctcttcattccagcgccgtgatgaccgtccggagcgtgcccacagccgcccagagcgt
tctgaccgccctgacagagacagcaaaggatttaaggaaggccgttttggccgttcagat
gaagaaacccaggaggctccggcctataacctgagacgctatgaagagcgccagaagaag
aaaaagccagagggtgccagtgatgaactgcgtctgaaccgctatatcgccaacgccggt
atttgttcgcgccgtgaggccgatgagcttattgccgccggtgagatcaaggtaaacgga
gaggtggtaaccgagatgggctataaagtagcgccttctgataccgtgcaatatggccgc
aaaacccttagccgggagaaaacggtgtacgtgctcctcaacaaacccaaagacttcctg
actactactgatgacccggaaggccgcaagactgtcatggatctgatcaagaatgcctct
aaggagcgcttgttcccggtaggccgtctggacagaaataccactggtctgttgctgttc
accaatgacggcgaactggcccagaaactgacgcacccgtctaacaaggtctctaagatt
taccaggtggagctggacaagcctatcacccaggaacacctgaagcagattcaggaaggg
gtggagctggaagacggcaaagccatagtagatgacttaggcctattaggtgacagcaac
aaattcctggggctggagatccacattggacgtaaccgcattgtacgccgcatctttgaa
cacctgggctatgacgttgtcaccctggaccgcgtgcaatatgccggccttaccaaaaaa
gacctgcctaggggcaactggcgcttcttgtcagaaaaagaagtggtgcgcctgaaatac
tttatgtaa
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