Ruficoccus sp. ZRK36: K0V07_01655
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Entry
K0V07_01655 CDS
T07427
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rufi
Ruficoccus sp. ZRK36
Pathway
rufi00300
Lysine biosynthesis
rufi00470
D-Amino acid metabolism
rufi01100
Metabolic pathways
rufi01110
Biosynthesis of secondary metabolites
rufi01120
Microbial metabolism in diverse environments
rufi01230
Biosynthesis of amino acids
Module
rufi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rufi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K0V07_01655
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K0V07_01655
Enzymes [BR:
rufi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
K0V07_01655
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QYY36182
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All DBs
Position
complement(393783..395045)
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AA seq
420 aa
AA seq
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METLKFLTPELARQIAADYGTPVYVYDEASLKRHAEAALAFPNAFGLTVRFAMKASPNAA
ILRVFHRLGLHIDASSGFEVRRALHAGIPAEHISLSTQEFPEDFAPLYKHGIRFNACSLA
QLERFGQLFPGCRCGLRVNPGLGSGGTGKTNVGGPNSSFGIWHEWLGEAEKIIAKYGLSV
IRIHTHIGSGSDPEVWERVALMSLETVKRFPDVVTLNLGGGYKVARMATEKATDLQVIGA
PVKAAFEKLAEETGRKLKLEIEPGTFLMANAGALLATVRDVVRTGGPDGMNFLKLDSGMT
EILRPSLYAAQHPIVIVPAQERAAGPEQDYLVVGHCCESGDILTTGSDDPEALQPRTLPE
TLPGDLCVVEGAGAYCAAMTAKNYNSFPEAPEVLVGLKGTVRLIRQRQTLDQIFQNEVDE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctgaagtttttgacgccggagctcgcccgccagattgcggcagactacggc
actcccgtttacgtgtacgatgaggcatcgctcaagcgccatgccgaggctgcgctggcc
tttccgaatgcctttgggctgacggtgcgcttcgccatgaaggcctccccgaacgctgct
atcctgcgtgtcttccaccggctcgggctgcacatcgatgcctccagcggcttcgaggtg
cgccgcgcgctgcacgcgggcatccccgccgagcacatttcgctcagcacgcaggagttc
ccggaagactttgcgccgctctacaagcacggcatccgcttcaacgcctgctcactggct
cagctcgagcgcttcgggcagctcttccccggctgccgctgtggcctgcgcgtgaacccc
ggtctcggctccggtggtaccggtaagaccaacgtcggcggcccgaattcgagcttcggg
atctggcacgagtggctgggcgaggccgagaagatcatcgccaagtacgggctgagcgtg
atccgcatccacacgcacatcgggtcgggcagcgacccggaggtatgggagcgcgtagcg
ctgatgagcctggagacggtcaagcgtttccccgatgtcgtgaccctcaacctcgggggc
ggctacaaggtggcccgcatggcgaccgaaaaggctaccgacctccaggtgatcggcgca
ccggtgaaggccgcgtttgaaaagctggcggaggaaaccggccgcaagctcaagctcgag
atcgagcccggcacgttcctgatggctaatgccggggcactgctggcgacggtccgcgac
gtggtccgcaccggcggccccgacggcatgaacttcctcaagctcgactccgggatgacg
gagatcctgcggccctcgctctacgcggcgcagcatccgatcgtcatcgtcccggcgcag
gagcgtgccgctggccctgagcaggactatctcgtggtcggccactgctgcgagtcgggg
gacatcctgaccacgggcagcgacgatccggaggctctccagccccgcacactgcccgag
acactgcccggcgacctctgcgtggtcgagggggcgggcgcatattgcgcagctatgacg
gcgaagaactacaactctttccctgaagcgccggaggtgcttgtcgggctcaagggcacc
gtgcggctcatccgccaacgccagacgctcgaccagatattccaaaacgaagtggacgag
tag
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