Ruficoccus sp. ZRK36: K0V07_02065
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Entry
K0V07_02065 CDS
T07427
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
rufi
Ruficoccus sp. ZRK36
Pathway
rufi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rufi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K0V07_02065 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rufi03400
]
K0V07_02065 (xseB)
Enzymes [BR:
rufi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
K0V07_02065 (xseB)
DNA repair and recombination proteins [BR:
rufi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
K0V07_02065 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
ABC_tran_CTD
KxDL
Nuf2_DHR10-like
DUF6206
DASH_Dad2
Motif
Other DBs
NCBI-ProteinID:
QYY36262
LinkDB
All DBs
Position
479953..480204
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AA seq
83 aa
AA seq
DB search
MPKTQTTEDAASFEEALERLENIVESLESGDIPLADLVTKYESGTRLAKFCQRKLDQAEQ
KIEKLRQEDGQISLEAFDADTAS
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaacgcaaacgacggaagacgctgcgtcttttgaggaagccctggaacgattg
gaaaatatcgtcgagagcctcgaaagcggagacatcccgctcgccgacctggtcaccaaa
tacgaatcgggaacccggctggcgaagttttgccaacgcaaactcgaccaagcagaacag
aaaatcgaaaaactcaggcaggaagacggtcagatcagcctcgaagcgttcgacgccgat
accgcctcctga
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