Ruficoccus sp. ZRK36: K0V07_03285
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Entry
K0V07_03285 CDS
T07427
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
rufi
Ruficoccus sp. ZRK36
Pathway
rufi02024
Quorum sensing
rufi03060
Protein export
rufi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rufi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
K0V07_03285 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
K0V07_03285 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K0V07_03285 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rufi02044
]
K0V07_03285 (secD)
Secretion system [BR:
rufi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
K0V07_03285 (secD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecD_1st
SecDF_P1_head
MMPL
Sec_GG
ACR_tran
DUF7750
Motif
Other DBs
NCBI-ProteinID:
QYY36500
LinkDB
All DBs
Position
complement(751799..754399)
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AA seq
866 aa
AA seq
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MKSSIIWKLILSVVIVGWAVLNLLPMENEDFDTFIQTRATAHQDEYQAFLDRAEGRVDDG
TPLFLAIKQQADEENLDLYHEFFPDVDLVYVKNQEKRNNVIMNVLYEESRGKLHLGLDLA
GGVAFTLKLKDTPENAAAAKVQLKEAVEIIQSRINGLGVAEPVIREVGNNQIEVQLPGLD
LEKNPEAADKLKKPAHLEFRLVHRDLVPGPGVTTPVGYEAMILEDEDDKGNIVERPYFVK
IIPEATGDIVDRAYPTTGMYGGFEIGLNFTSEGGEAFADMTRKIAAEDKARNALGSGKMA
IVLDGKLYSALGLNNGEPITGGSARITGRFSQIEAEELANVLNNPLKFELEVGEKYVISP
TLASDARTASIEACLLGAGLVVAFMIFYYLLAGVVSVASVGLSVVVVLGVLMSVGGTLTL
PGIAALVLTIGMAVDANILIFERMREELTAGKNPKNALRGGYEKAFSTIVDANITTLITA
GILIWLGAGPVKGFGVTLAIGIGASMFGALVISRFLLEILVSVGLLKRISLFGFLNKAKF
NFLRVRRPAFICSWCIVALGIFAVATHMNHILGIDFRGGVEITMDFDSAHRPSIAEIDSL
AEANDLGEIQAGFQSIIGTSNERLKLQIDTAEGRAEQVVAALQQAFPDSQLTKLSESAVG
ATVSDSITRNAFLSVAVALVGILLYVALRFEFGYGIGAVVATVHDVLMSIGLFVVVGQYF
GIGSGQFTAPMVAAILMIVGYSINDTIVVFDRIREELDLNPDMNLFDTVNLAINRTLSRT
LLTSLTTLMAAIALYIFGAGVVIDFALIFIIGILTGTFSSIFIASPVFFWWHKGSRQHVT
ERHLTRPTYEWETTTRRARDAGPDKA
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagttccattatctggaaactgatccttagtgttgtcatcgtcggttgggccgtg
ctcaacctgctgccgatggagaacgaggatttcgacacgttcatccagacccgcgcgacc
gcccatcaggacgagtaccaggccttcctcgaccgtgctgaagggcgcgttgacgacggc
acaccgctgttcctggctatcaagcagcaggccgatgaggaaaacctggacctgtaccac
gagttcttcccggatgtggatctggtgtacgtcaagaaccaggaaaagcgcaacaacgtc
atcatgaacgtcctctatgaggagtcgcgcggcaagctccacctcggcctcgacctcgcc
ggtggtgtggcctttaccctcaagcttaaggatacccccgagaacgccgccgctgccaag
gttcagctcaaggaggcggtcgagatcattcagagccgtatcaacggcctgggtgtggcc
gagccggtcatccgtgaggtcggtaacaaccagatcgaagtccagctgcccggtctcgac
ctggagaagaaccccgaagccgccgacaagctcaagaagcccgcgcacctggagttccgc
ctcgtccatcgcgatctcgtccccggccccggcgtgacgacccctgtcggctatgaggcc
atgatcctcgaagacgaggacgacaagggcaacatcgtcgagcgcccctactttgtaaaa
atcatccccgaagccaccggtgatattgtcgatcgggcttacccgacgaccggtatgtac
ggtggcttcgagatcgggctcaacttcaccagcgagggcggagaagccttcgcggacatg
acccgcaagatcgctgccgaggacaaagcccgcaacgctctgggctcgggtaagatggct
atcgtgctcgacggtaagctgtacagtgctctgggtctgaacaacggtgagcctatcacc
ggcggcagcgcccgcattaccggacgcttttctcagatcgaggccgaggagctggccaat
gtcctcaacaacccgctcaagttcgagctggaagtcggcgaaaaatacgtgatcagcccg
acgctggccagcgatgctcgcaccgcctctatcgaggcctgcctgctcggtgccggtctg
gttgtggccttcatgattttctattacctgctggcaggtgtggtctccgtggcctccgtt
ggcctgtctgtggttgtggtgctgggtgtgctcatgagtgtgggcggtaccctgaccctg
cccggtattgcggccctcgtgttgaccatcggtatggccgtggacgcgaacatcctcatc
ttcgagcgtatgcgtgaggagctgaccgcgggcaagaacccgaagaacgccctgcgcggc
ggctacgaaaaggctttctccaccatcgttgacgccaacatcaccaccctcatcaccgcc
ggtatcctcatctggctcggtgccggtccggtcaagggcttcggggtgacgctggccatc
ggtattggcgcctccatgtttggtgcgctggttatcagccgtttcctgctggagatcctc
gtcagcgtcggcctgctgaagcgcatttcgcttttcggcttcctcaacaaggccaagttc
aacttcctgcgtgtgcgccgcccggcctttatctgctcctggtgcattgtcgcgctgggt
atcttcgccgtggccacccacatgaaccacatcctcgggatcgacttccgcgggggcgtg
gagatcacgatggactttgactctgctcaccggccgagcatcgctgagatcgatagcctc
gctgaagccaacgatctgggcgagatccaggctggcttccagagcatcatcgggaccagc
aatgagcggctcaagctgcagatcgacaccgccgaaggccgtgccgagcaggttgtagcc
gccctccagcaggcctttcccgactcgcagttgaccaagctcagtgaaagcgccgtgggc
gcgacggtgagcgactcgatcacccgcaatgccttcctctcggtggccgtggctctggtc
ggtatcctcctttacgtggccctgcgcttcgagtttggctacgggatcggtgccgtggtg
gccaccgtgcacgacgtgctcatgtccatcggcctctttgtcgtggtcgggcagtacttc
gggattggcagtggccagttcaccgctccgatggtggccgcgatcctcatgatcgtcggt
tactcgatcaatgacaccatcgtcgtgttcgaccgtatccgtgaggagctcgatctgaac
cccgatatgaacctctttgacacggtcaacctcgcgatcaaccgcacgctctcgcgtacg
ctgctgacctcgctgaccaccctcatggccgcgattgcactgtacatctttggggcaggc
gtggtgatcgacttcgcgttgatcttcatcatcggcatcctcaccggtaccttctcgtcc
atctttatcgccagcccggtattcttctggtggcataagggtagccgtcagcacgtgacc
gagcgccacctcacgcgcccgacctacgagtgggaaaccaccacccgccgtgcgcgcgac
gccggtccggacaaggcctga
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