Ruficoccus sp. ZRK36: K0V07_03810
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Entry
K0V07_03810 CDS
T07427
Name
(GenBank) PD-(D/E)XK nuclease family protein
Organism
rufi
Ruficoccus sp. ZRK36
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Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QYY36602
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Position
871908..874772
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AA seq
954 aa
AA seq
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MTTVRHLICSRPGTAWEEALRPWFEQIGREAWAAEKPVAVLLPDGVAASVLKRQLAQAGL
PLVGIDIFTPGRLRHRLADAARRDRPVAVREELTLFLRLAAQQLPDNVFARAVLADPQSF
LRDFDRLEAVGWMDEVFDFAPANELLRALRSQLEAAGMQTAAEAARLPTPTEPVFTHLLA
SGFGPGHAEHFFLLQSALSAAETATVIFSQPISDSPADFAWSEDWESLLGPAEPAPGLAD
PPATPESEPGFLLAPDPRMEAALIADQVERWLAEQADAVIGVVFPHRALSLPREIALKLE
DARLPHYDAGGHTAARPPGFQLLEAWSAMQESQRLQEAVDFVRALRAHRELPADEAERLL
RVLRETFSMAMTDDLAVIRAAAATVPEAVTFFSQWPTLPERATLAEFTEAARPVLERFAW
PERLDFLTERVALLAPRLDGPLERAGFLGWLSKMVDRPGRTRGEAGRHPLARVALVTAQE
ALTGDWTHLIFTGMNGRQWESPTPASGLLSEPLIRRLNARAGYAEDGGGTFDGQHGRLLT
PGEEAALIESGFWHLYSQTGAETVCTAARRDNPASTRSSPLNDLFLKAWHLTHGEIPGEE
ACARLEATSLSRLPAAEAGADFPGCAGFIGVHQNRRNPALPFDGHFFGFDIAPPGGLDFS
FSQWEEVFKTPGYTWIKQAIRTDVAWNPDAERSLAQALGLWVHDWADPLPTDATWGTPPD
EEDWQKRAETKADKVARRFSAAYEAAHRRLPDWWSESHASALARTKQLIEATATAAREFA
PRGLLAGEFKLPEGALELYPGSASLRMRGRIDLILHNGPDPENTPGEAWIVDFKTGSRSA
LNAKRFAEADGLQLGLYALALRQLGYGPVLLSLLTPGKPLKTQLTDEDVRGSVALLSTVS
AIHSSGTVGHRGAFRDRFSFCGHYPLATLVIGPATLKGKWLRTHGGEEDEEVAT
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgtccgccacctgatctgcagtcgccccggcaccgcctgggaggaggcgctg
cgtccgtggtttgagcagatcgggcgtgaagcctgggcagcggaaaagcccgtcgccgtc
ctgctgccggacggagtggctgcctccgtgctcaagcgccagctcgcgcaggcgggcctg
cctctggtggggatcgacattttcacccccggacggctgcgccaccggctggccgacgct
gcccgccgggaccgcccggtggcggtgcgcgaggagctgaccctctttctgcggctggcc
gcccagcaactaccggacaacgtctttgcccgtgccgttctggccgatccgcaatcgttc
ctgcgtgattttgaccgactggaggcagtgggctggatggatgaggtctttgactttgct
ccggctaacgagctcctgcgcgccctgcggagccagctcgaagccgccgggatgcagacg
gccgccgaggccgcgcgcctccccactcccaccgagccggttttcacccacctgctggcc
agcggctttggccccggccatgctgagcattttttcctgctccagagcgccctgtctgcc
gccgaaacggcgaccgtcatcttcagccaacccatttccgactccccggctgatttcgcc
tggtcggaggactgggaatcgctcctcggccccgccgagcccgctcccggactggccgat
ccgcccgccactcctgagagcgagccgggcttcctcctcgcccccgacccccgcatggag
gccgcgctcatcgccgatcaggtcgagcgttggctggccgagcaggccgatgccgtcatt
ggggtggtgttcccacaccgcgccctgtcgctcccgcgcgaaatcgccctgaagctggaa
gacgcacgcctcccccactacgacgccggtggccataccgcagcccgaccgccaggcttt
caactgctggaggcatggagcgccatgcaggagagccaacgcctgcaggaggcggtggac
ttcgtgcgcgcgctgcgggcccaccgtgagctgcccgctgacgaggccgagcgcctgctg
cgtgttctacgtgaaacattttccatggccatgaccgacgacctcgcggtcatccgggcc
gctgcggccacagtcccagaggccgtcacgtttttctcccaatggcccacgctacccgag
cgcgccacgctggccgagttcaccgaggcagcccgccccgtgctggagcggttcgcctgg
ccggagcggctggacttcctgaccgaacgcgtcgctctgctcgctccccggctggacggc
cccctcgaacgcgcgggcttcctcggctggctgagtaaaatggtggaccgccccggccgc
acccgtggtgaagccggacgacaccccctggcgcgcgtggcactcgtcaccgctcaggaa
gccctcaccggggactggacgcacctgatctttaccgggatgaacggccgccaatgggag
tcgccgacaccggcctccgggctgctaagcgagcccctcatccgccgcctcaatgcccgt
gccgggtatgccgaggacggaggcggcacctttgacgggcagcatggccgcctgctcacc
cccggcgaagaggccgccctgatcgagtccggtttctggcatctctactctcagaccggt
gccgaaaccgtctgcaccgccgcccggcgggacaaccccgcctccacccgctccagtccg
ctcaacgacctctttctcaaggcctggcacctcacccacggcgagatccccggcgaagag
gcctgtgcacggctcgaagccaccagtctgtcccgcctgcccgcagccgaggcaggggca
gacttccccggctgcgcgggctttatcggcgtccaccaaaaccgccgcaaccctgccctg
ccctttgacggacactttttcggcttcgatatcgccccgcccggtgggctcgacttctcc
ttctcgcagtgggaggaggtctttaaaacccccggctacacctggatcaaacaagccatc
cgcaccgatgtagcctggaacccggacgccgagcgttcgctcgctcaggccctcgggctt
tgggtccacgattgggccgacccgctccccaccgacgccacctggggcacaccgcccgac
gaggaggattggcagaaacgggccgagaccaaagccgacaaggtcgcccggcgcttctca
gctgcctacgaggcggcccaccgccgcctgcccgactggtggagcgaatcccacgcctcc
gccctcgcccgtaccaagcaacttatcgaggccaccgcgaccgccgcccgtgaattcgcc
ccccgggggctgctggcgggagagttcaagctgcccgagggcgcactggagctttatccc
ggcagtgcctccctgcgcatgcgcggccgcatcgacctgattttacacaacggccccgac
ccggaaaacactcccggcgaggcctggatcgtggactttaaaaccgggagccgcagcgcc
ctcaatgccaagcgcttcgccgaagccgacgggctccagctcgggctctacgcactggcc
ctgcgccagcttggctacggccccgtcctgctgagcctgctcacgcccggcaagcccctg
aaaacccagctcaccgacgaagacgtgcgcggcagcgtcgccctgctctcaaccgtctcg
gccatccacagcagcggcacggtcggccaccgcggcgcctttcgcgaccgcttcagcttc
tgtgggcactacccgctggccacgctcgtcatcggcccggccaccctcaagggcaagtgg
ctgcgcacccacggcggcgaggaagacgaggaggttgcgacatga
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