Ruficoccus sp. ZRK36: K0V07_06255
Help
Entry
K0V07_06255 CDS
T07427
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rufi
Ruficoccus sp. ZRK36
Pathway
rufi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rufi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K0V07_06255 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rufi03400
]
K0V07_06255 (xseA)
Enzymes [BR:
rufi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
K0V07_06255 (xseA)
DNA repair and recombination proteins [BR:
rufi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
K0V07_06255 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
HROB
Motif
Other DBs
NCBI-ProteinID:
QYY37079
LinkDB
All DBs
Position
1406273..1407622
Genome browser
AA seq
449 aa
AA seq
DB search
MALDLTTPHDDAILSVGDFTRQVKELLESNLPPCWVRGEISNLRRQQSGHVYFTLKDSRS
QLSCVLFRGDAMRQRAELRDGLQVVVYGQVSVYEPRGTHQLICRVVMEDGAGRLQQEFER
LKQKLSAEGLFDAERKRPLPSLPRAVGFVTSPTGAAIRDFLSILARRGWRGRIVVIPAQV
QGNGAAEQIVAGIEAAQRVDGLDLLVVGRGGGSLEDLWCFNEEIVARAVAACSLPVISAV
GHEIDFTLSDFAADKRAETPSAAAELISSGYLEMLDRLDLARDGLHELAARTLERLGHRL
DAAGSGLERRHPQPRLEQASLRLDDLNNRLRSGLRHILSDRRSVLKDSIHKLAAYTPESV
LRVAGVELKAARERTERASSVQLRQKREYLKQLRTRLENASLKKALDRGFAVARDERGEL
VCAKSGLKPGQRLALDFRDGEILVRVEDM
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggacctgacaacaccccacgatgacgcgatcctctcggtcggtgacttcacc
cgccaggtgaaggagctgctggagtcgaacctgcctccgtgctgggtgcggggggaaatc
tccaacctgcgccgccagcaaagcgggcacgtttatttcaccctcaaggatagccgcagc
cagctctcgtgcgtgctgtttcgtggagacgccatgcgccagcgcgccgagctgcgcgac
gggctccaggtcgtcgtctacgggcaagtcagcgtctacgagccacgcggcacgcaccag
ctcatctgccgcgtggtgatggaggatggggccgggcggcttcagcaggagtttgagcgg
ctcaagcagaagctctccgccgaagggctctttgatgcggagcgtaagcgtccgctgccg
tctctaccgcgcgcggtgggctttgtcacatcgccgacaggggcagccattcgcgacttt
ctcagcatccttgcccgtcgtggttggcgagggcgcatcgtcgtcatccctgctcaggtg
cagggtaatggcgcggctgagcagatcgtggctggtatcgaggccgcacagagggtggac
ggcctcgacctgctcgtcgtgggcaggggaggtggcagccttgaagacttgtggtgcttc
aacgaggagattgtggctcgcgcggttgccgcgtgttctctgccggttatttctgccgtc
ggccacgagattgattttacgctgagtgacttcgccgcggataaacgcgcagagacaccc
tccgccgctgccgagctgatcagcagtggttacctggagatgctggaccggctcgatctg
gctcgcgacggcctgcatgagctggcagcccgtacgctggagcgcctcggtcaccgactg
gatgcggctggctccggtctggagcgccgccacccgcagccccggctggagcaggcaagc
ctgcggctggatgatttaaacaaccgccttcgctcaggcctgcggcacatcctgtcggat
cgccggagtgtattgaaagattcgatacataagctggccgcctacacgcccgagtcggtg
ctgcgagtggcgggcgtggagctaaaggccgcccgtgagcggacggagcgcgcctcgtcg
gtccaactgcgtcaaaagcgagagtacttgaagcagcttcgtacgcgtctggagaacgcc
agcctgaaaaaggcgctcgatcgtggctttgctgtggcgcgtgacgagcgcggcgagttg
gtctgtgcgaaatccgggctcaagcccggtcagcggttggcgctcgacttcagggacggt
gagatcctcgtccgtgtcgaggatatgtag
DBGET
integrated database retrieval system
