Ruficoccus sp. ZRK36: K0V07_07910
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Entry
K0V07_07910 CDS
T07427
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rufi
Ruficoccus sp. ZRK36
Pathway
rufi00521
Streptomycin biosynthesis
rufi00523
Polyketide sugar unit biosynthesis
rufi00525
Acarbose and validamycin biosynthesis
rufi00541
Biosynthesis of various nucleotide sugars
rufi01100
Metabolic pathways
rufi01110
Biosynthesis of secondary metabolites
rufi01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rufi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
K0V07_07910 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
K0V07_07910 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
K0V07_07910 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
K0V07_07910 (rfbB)
00525 Acarbose and validamycin biosynthesis
K0V07_07910 (rfbB)
Enzymes [BR:
rufi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
K0V07_07910 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
KR
Sacchrp_dh_NADP
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
QYY37494
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Position
complement(1799802..1800872)
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AA seq
356 aa
AA seq
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MMKLLLTGGAGFIGSNLVRYLVTQPEVHVVNVDKLTYAGNLESLADIKDRPNYTFCQTDL
CDASAVRKLFAEHQPDGVLHLAAESHVDRSIDGPDQFIQTNILGTYNLLQGALEHYHSLT
ESKRGQFRFLHVSTDEVYGSLGPSDPAFSETTAYQPRSPYSASKAASDHLAHAWHHTYGL
PVIVTNCSNNYGPYQFPEKLIPVAILKCLKGEPIPVYGKGENVRDWLYVGDHCRALWKAW
QHGKPGETYNIGGNSECRNIDLVKMLCQLLDELQPAPDGKSYESLISFVEERPGHDLRYA
IDSRKIQRELDWSPTESLTSGLRKTVQWYLDNRTWWEHILSGEYQLNRLGLDTRRA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atcatgaagttactcctcactggcggagcaggtttcatcggctcaaatctggtcaggtat
ctggttacgcaaccagaggtgcacgtagtcaatgtcgacaagctcacctacgcgggcaac
ctggaatctctggccgacatcaaagaccggcccaactacaccttttgccagaccgacctg
tgcgacgccagtgctgtacgcaagctgttcgccgagcatcagcccgatggcgtcctgcat
ctggctgccgagtcccatgtggaccgctcgatcgacggccccgatcagtttatccagacg
aacatcctgggcacttataacctcctgcaaggagccttggagcactaccacagcctcacc
gagagtaagcgcgggcagttccgcttcctgcacgtctccacagacgaggtttacggctcc
ctcggccccagcgatccggccttcagcgaaacgacggcctatcagccgcgttccccctac
tctgccagcaaggccgcctctgaccatctggcacacgcctggcaccacacctatgggctg
ccggtgatcgtcacaaactgctcaaacaattacggcccctaccagtttccggaaaagctc
atcccggtcgccatcctcaagtgcctcaagggagagcccatccccgtctacggcaagggg
gagaatgtccgcgactggctctatgtgggtgaccactgccgggcgctctggaaagcctgg
cagcacggcaagcccggtgagacctacaacatcgggggcaatagcgaatgccggaacatc
gacctggtcaaaatgctctgccagctcctcgacgagcttcagcctgcccccgacggcaag
agctacgagagcctgatctcgttcgtcgaagagcgtccggggcacgacctgcggtatgcc
atcgattcacgtaagatccagcgtgagctggactggtctccgacagaaagtctgacctcc
ggcctgcgcaaaaccgtccaatggtacctggacaaccgaacctggtgggaacacatcctg
agtggagagtaccaactgaatcgactcggcctcgacacccggcgcgcataa
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