Ruficoccus sp. ZRK36: K0V07_09115
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Entry
K0V07_09115 CDS
T07427
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rufi
Ruficoccus sp. ZRK36
Brite
KEGG Orthology (KO) [BR:
rufi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rufi03032
]
K0V07_09115
03036 Chromosome and associated proteins [BR:
rufi03036
]
K0V07_09115
03400 DNA repair and recombination proteins [BR:
rufi03400
]
K0V07_09115
DNA replication proteins [BR:
rufi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K0V07_09115
Chromosome and associated proteins [BR:
rufi03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
K0V07_09115
DNA repair and recombination proteins [BR:
rufi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
K0V07_09115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QYY34468
LinkDB
All DBs
Position
2065679..2066005
Genome browser
AA seq
108 aa
AA seq
DB search
MAGNLTKRDIVLAIYDKTNFPQKEVRETVQLTLDCIADALAEGRNVELRNFGVFEVQVRK
SRIGRNPNRPETDVVIPTRAVIKFKAGKELKAALKDIDLDKLQEPKQD
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaaccttaccaagcgggacatcgtacttgccatctatgacaagaccaacttc
ccgcaaaaagaagtccgggaaacggtccagctcacgctggattgtattgccgacgccttg
gcggaagggcgtaatgttgagttgcgcaattttggcgtatttgaagtgcaggtccgcaag
agccgcatcggacgtaacccgaaccgccctgagaccgacgtggtcattccgacgcgcgcc
gtgatcaagttcaaggccggtaaggagctcaaggctgcgctgaaagacatcgacctggat
aagctccaggagccgaagcaggactag
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