Ruficoccus sp. ZRK36: K0V07_09465
Help
Entry
K0V07_09465 CDS
T07427
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rufi
Ruficoccus sp. ZRK36
Pathway
rufi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rufi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K0V07_09465 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rufi03021
]
K0V07_09465 (rho)
03019 Messenger RNA biogenesis [BR:
rufi03019
]
K0V07_09465 (rho)
Transcription machinery [BR:
rufi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
K0V07_09465 (rho)
Messenger RNA biogenesis [BR:
rufi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K0V07_09465 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
AAA_22
Spore_III_AA
ATPase_2
AAA
Motif
Other DBs
NCBI-ProteinID:
QYY37505
LinkDB
All DBs
Position
2158592..2160682
Genome browser
AA seq
696 aa
AA seq
DB search
MNFTLESDQAPAPKKKTARKSVRRGSARKKAVAPTDDAPQESAPEPQAAASSESAPQDEP
KPKKKIARKQARKAKEEEDDIPQTFSADPDDVDDYGDRDARNRRQDDDRDSDNDRDDNSD
NSREPRGDERASRQDSRDNGDDSDGSDNRSGRGDSNQNRNNNRPNQQNRGNDKYNRRDKN
QQGGKQHWQPKGNKNFKKGNFQPGGNPNQQGGKKGKFNKNQRKKGFFQPAGGFAASSDDD
YDPPVYDSLLDDESLNTAEAFDALRAEKTAGEAEAISYNELNELNLPDLEKRARELGAEW
EGAPVKKKLLRAILDKASTDNTPVRARGIVELADDGYGFIVYESEQYRVLSESAFLHSSF
AERYGLQRGHIVDVLLHPARENETTPFVIGVEKIMDTEPESVQHLTPFTELVPYYPLERI
LLECPPDEVDWDNNSMRIVDLLTPIGLGQRGLIVAPPRTGKTVLMQGMAKAITKNRPDVH
LIILLVDERPEEVTDFRRQVEEAEVICSTFDESAESHVHAAEMVIEKSRRMVESGKDVVI
LLDSITRLARAYNTLMPSSGKILSGGVEAGALQKPKRFFGSARNIEGGGSLTILGTALVD
TGSKMDEVIFEEFKGTGNMELHLDRDLVNKRIYPALNFEKSGTRKEELLYHPHEMEKIYA
LRRAMKGVPSTEAMEMLITRIKKTKTNAEFLMTMSR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcacgctggagagcgaccaggctcccgcgcccaagaaaaagaccgcccgcaag
agcgtccgccgcggctccgcccgtaagaaagcggttgcccccacggatgatgctccgcag
gagagcgcgcctgagcctcaggccgccgccagctccgagtctgcccctcaggacgagccc
aagcctaagaagaagatcgctcgcaagcaggcccgtaaggccaaggaagaagaggacgac
atcccccagactttttccgccgaccccgacgatgtggacgactacggtgaccgcgacgcc
cgcaaccgtcgtcaggatgatgatcgcgatagcgacaacgaccgcgacgataacagcgat
aattcccgcgagcctagaggcgacgagagagcctcccgccaggattcccgcgataatggc
gacgactccgatggctctgataaccgctccggtcgcggtgattcgaatcagaaccggaac
aacaaccgccccaaccagcagaaccgcggtaacgacaaatacaatcgtcgcgacaaaaac
cagcagggcggtaagcagcactggcagccgaaggggaacaagaatttcaagaagggcaac
ttccagcccggcggcaacccgaaccagcagggcggcaagaagggcaagtttaacaagaac
cagcgcaagaagggcttcttccagcctgccggtggtttcgccgcctccagcgacgatgat
tacgatccgcccgtgtacgactcgctcctcgatgacgagtcgctcaacaccgctgaagcc
tttgatgctctccgtgcggagaaaacagccggtgaggctgaggccatttcttataatgag
cttaacgagctgaacctgcccgacctcgaaaagcgtgcccgcgagctgggtgccgagtgg
gagggtgcgccggttaaaaagaagctccttcgcgccattctcgacaaggcttccaccgat
aacacaccggtgcgagcccgtgggattgtagagctggccgacgatggctacggcttcatc
gtgtacgagtccgagcagtaccgcgtactgtccgagagtgcgttcctgcacagcagcttt
gccgagcgttacggcctgcagcgtggccacatcgtggatgtgctcctgcacccggcccgt
gaaaacgagacgaccccctttgtcattggcgttgagaagatcatggacaccgagccggag
tccgtgcagcacctcacgccctttaccgagctggtgccgtactacccgctggagcgtatc
ctgctggagtgcccgcccgacgaggtggattgggataacaactccatgcgcatcgtggac
ctgctcacgcctatcgggctggggcagcgcgggctcatcgtggccccgccgcgtacgggt
aagaccgtcctcatgcagggcatggccaaggctatcacgaagaaccgccccgacgttcac
ctcatcattctgctcgtggacgagcgtcccgaggaagtgacggacttccgccgccaggtg
gaagaggccgaggtgatttgctcgacctttgacgagtcggccgagagccatgtgcacgcg
gctgagatggtcatcgaaaagtcgcgccgcatggtggaaagcggtaaggacgtggtcatc
ctgctggactcgatcacgcgtctggcccgcgcctacaacaccctcatgcccagcagcggc
aagatcctctccggtggtgtcgaggctggtgccctccagaagcccaagcgtttcttcggg
tcggcccgtaacatcgagggcggcggcagcctgaccattctgggcacggcgctcgtcgat
accggcagtaagatggatgaggttattttcgaggagttcaagggcaccggtaacatggag
cttcacctcgaccgtgatctggtcaataagcggatttacccggcgctcaactttgagaag
agtggcacgcgtaaggaagaactgctctaccacccgcacgagatggagaaaatctatgcc
ctgcgtcgcgcgatgaagggcgttccctccaccgaggccatggagatgctcatcacccgc
atcaagaagaccaagaccaacgccgagttcctcatgactatgagccgctag
DBGET
integrated database retrieval system
