Ruficoccus sp. ZRK36: K0V07_12900
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Entry
K0V07_12900 CDS
T07427
Name
(GenBank) 3'-5' exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
rufi
Ruficoccus sp. ZRK36
Pathway
rufi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rufi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K0V07_12900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rufi03400
]
K0V07_12900
DNA repair and recombination proteins [BR:
rufi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
K0V07_12900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QYY35190
LinkDB
All DBs
Position
complement(2934867..2935532)
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AA seq
221 aa
AA seq
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MHWKDCPIHVVDFEGSRSSGVVEFGVVTLWDGDIASCATRLCRPRGEITPQERAQHGIVE
DEARLFEPFAAEWERFTGMRAKGPLAAHHAMVENGFLKAQWAYPPASPDFLHEGAEIADW
GPWIDTRQLYAQVYPDLGGYGLSELVATFELQDRLNAEGDRHCPQRRGKYHCALYDALAS
ALLLERLGEQEGFENMSIEWLITHSQASASKREAASQGGLF
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcattggaaagattgccccatccatgtggtggactttgaaggcagccgcagcagcggt
gtggtcgagttcggtgtcgttacgctctgggacggtgatatcgccagctgtgcgacgcgt
ctgtgccgcccgcgtggcgagatcaccccgcaggagcgggcccagcatgggatcgtcgag
gatgaggcgcggctctttgagccgttcgcggccgagtgggagcgcttcactggcatgcgc
gcaaaggggccgctcgccgcccaccacgccatggtcgagaatggctttctcaaggctcag
tgggcttacccgccagcttccccggacttcctgcatgagggcgctgaaatcgccgactgg
ggcccctggatcgacacccgccaactctacgcgcaggtgtacccggacctcggtggctac
ggcctgtccgaactggttgcgacctttgagctacaggaccgcctcaatgccgaaggcgac
cgccactgcccgcagcggcgcggcaagtaccactgcgccctctacgatgcgctggcctcg
gcgctgttgctggagcgactgggcgagcaggagggctttgagaacatgagcatcgagtgg
ctcatcactcacagtcaggcctccgccagtaaacgagaagccgccagccagggtggactg
ttttaa
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