Ruficoccus sp. ZRK36: K0V07_13775
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Entry
K0V07_13775 CDS
T07427
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rufi
Ruficoccus sp. ZRK36
Brite
KEGG Orthology (KO) [BR:
rufi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rufi03032
]
K0V07_13775 (gyrA)
03400 DNA repair and recombination proteins [BR:
rufi03400
]
K0V07_13775 (gyrA)
Enzymes [BR:
rufi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K0V07_13775 (gyrA)
DNA replication proteins [BR:
rufi03032
]
Prokaryotic type
DNA Topoisomerases
K0V07_13775 (gyrA)
DNA repair and recombination proteins [BR:
rufi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K0V07_13775 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QYY35355
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Position
3135113..3137599
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AA seq
828 aa
AA seq
DB search
MYTENERLEPRPITQIMETAYIDYSMSVIVSRALPDARDGLKPVQRRILYAMQDIGLSHN
RPFKKCAAVVGEVLGKYHPHGDQSVYDALVRMGQFWVMRYGLIDPQGNFGSIDGDPPAAY
RYTECRLASMAEDLMRDIDKDTVDFVPNYNEETVEPSVVPSGLPNLLMNGSTGIAVGMTT
NIPPHNLGELVEATCAIIDNPNITIDELISIIPGPDFPTGGTIAGRGGIDSYMRTGRGIV
RIKGTAHVEEIKNGKEQIVITEIPYNVNRANLVTKIADLVHDKVLNEVSDLRDESDENTR
IVIELKRDESSRVVINKISKHTPFESSFGVILLALDKRRPKQMNIKEMITCYIEHRREVV
YRRTQYLLRKAEDRAHILEGYKIALNNLDDFVKIIRASSNREEAREKLMDKYALSERQAN
AILDMRLYQLTGLERDKIEEEYRQLMITIEEYRSILASEQKLLTVIKEELNELKIKYESP
RKTQILGEEGEFRMEDVIANEGCIITVSHKGFIKRTPVSSYRSQRRGGKGVIGSGQHEED
FTEHLFTASTHDYIMFFMNNGRVYVEKVYEIPEGTRTSKGRSIVNVLQMQKGESIAAMIC
VKEFEGDDSLIMCTKKGTVKRTMLSEYANYRKGGIIGIKIDDDDELIGCKLVKDGDDVVL
VTHHAMSIRFTINESNVRAMGRATRGVKGITLKKADDFVEAIELVDPNAALLIAGENGIG
KRTSYDEYRVQSRGGSGIIATKTQGNVAGALSVREEDEIMMFTLGGQAVRSPVKDIRVIG
RATQGVRLINLADGDTLVGISRIVEVEDEKLEAEAEAAAEEATESDES
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgaaaacgaacgcctcgagcctcgcccgatcactcagatcatggagacggcc
tacatcgactactcgatgtcggttattgtttcgcgcgccctgcctgatgcccgcgacggc
ctcaagcccgtccagcgccgtatcctctacgcgatgcaggacatcgggctctcccacaac
cgcccctttaagaagtgcgccgctgtcgtcggcgaagtgctgggtaagtaccacccgcac
ggtgaccagtccgtctatgatgcgctcgtgcgcatgggacagttctgggtcatgcgttac
ggtctgatcgacccgcagggtaacttcggctccatcgacggtgacccgcccgctgcttat
cgttacaccgagtgtcgcctcgccagtatggccgaggacctgatgcgcgacatcgacaag
gacacggtcgacttcgtccccaactacaacgaagaaaccgtcgagccctccgtcgtcccc
tccggcctgccgaatcttttgatgaacggctccaccgggatcgccgtgggtatgaccaca
aacatccccccgcacaatctcggggaactggtcgaggccacctgcgccatcatcgacaac
ccgaacatcacgatcgatgagctgatttcgatcatccccggcccggacttccccacgggc
ggcaccatcgccggtcgcggcgggatcgatagctacatgcgcaccggtcgcggcatcgtc
cgcatcaagggcaccgcgcacgtcgaggagatcaagaacggtaaggaacagatcgtcatc
accgagatcccttacaacgtcaaccgcgcgaacctcgtcaccaagatcgctgacctcgtt
cacgacaaggtgctcaacgaagtctccgacctgcgcgacgagtccgacgaaaacacccgc
atcgtcatcgaactcaagcgcgacgagtccagccgcgtcgtcatcaacaagatttccaag
cacacgcctttcgagagctcctttggcgtgatcctgctcgctctcgataagcgccgcccg
aagcagatgaacatcaaggagatgatcacctgctacatcgagcaccgccgcgaggtcgtt
taccgccgcacgcagtacctgctccgcaaggccgaagaccgcgcccacatccttgagggt
tacaagatcgccctcaacaacctggacgacttcgtcaagatcatccgcgcctccagcaac
cgtgaagaggcccgtgagaagttgatggacaagtacgccctctccgagcgtcaggccaac
gccatcctggacatgcgcctgtaccagctgaccggcctggagcgcgacaagatcgaggag
gaataccgccagctcatgatcaccatcgaggagtaccgctctatcctggccagcgagcag
aagctgctgaccgtgatcaaggaagagctcaacgagctcaagatcaagtacgagtccccg
cgtaagacccagatcctcggcgaggaaggcgaattccggatggaagacgttatcgctaac
gagggctgcatcatcaccgtttcccacaagggcttcatcaagcgcaccccggtcagctcc
taccgttcgcagcgtcgcggcggcaagggcgttatcggctccggccagcatgaggaagac
tttaccgagcacctcttcaccgcctccacccatgactacatcatgttctttatgaacaat
ggtcgcgtctacgtggagaaggtttacgagatccccgagggcacccgcacctccaagggc
cgctccatcgtcaacgtgctccaaatgcagaagggcgaatccatcgccgccatgatctgc
gtcaaggagttcgaaggcgacgacagcctgatcatgtgcaccaagaagggcaccgtgaag
cgcaccatgctctccgagtacgccaactaccgcaagggtggcatcatcggcatcaagatt
gacgacgatgacgagttgatcggctgcaagctcgttaaggacggcgacgacgtagtgctg
gttacccaccacgccatgagcatccgctttaccatcaacgagagcaacgtccgcgccatg
ggccgcgccactcgcggggtcaagggcatcaccctgaagaaggccgacgacttcgtcgaa
gccatcgagctggtcgacccgaacgccgccctcctcatcgcaggcgagaacggcatcggc
aagcgcaccagctacgacgagtatcgcgtgcagagccgtggtggctcgggcatcatcgcc
accaagacccagggcaatgtcgctggcgcactcagtgtccgcgaagaggacgagatcatg
atgttcacgctcggcggccaggctgtccgcagccccgtcaaggacatccgcgtcatcggt
cgcgccactcagggcgtccgcctgatcaacctcgccgacggcgataccctcgtgggcatc
tcccgcatcgttgaggtcgaggacgaaaagctcgaagctgaggccgaggccgcagctgaa
gaagccaccgaatccgacgaatcctga
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