Ruficoccus sp. ZRK36: K0V07_15950
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Entry
K0V07_15950 CDS
T07427
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rufi
Ruficoccus sp. ZRK36
Pathway
rufi00470
D-Amino acid metabolism
rufi00550
Peptidoglycan biosynthesis
rufi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rufi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K0V07_15950 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K0V07_15950 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rufi01011
]
K0V07_15950 (murD)
Enzymes [BR:
rufi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
K0V07_15950 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rufi01011
]
Precursor biosynthesis
Amino acid ligase
K0V07_15950 (murD)
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
DUF6510
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
QYY35778
LinkDB
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Position
complement(3654613..3655938)
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AA seq
441 aa
AA seq
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METPDLLKPLLDRPAAIFGAGVSGAAAGDLLRSQGWLYEVFDERGGQYAHRKFGAKEAAR
HGLVVHSPGFPPSHPWFEAARKAGCLVLGELDFASLFWGGGCIAVTGTNGKTTVTEFLAY
AFKRAGNKAVAVGNIGYPMSRLFELSNHEGALAVCEVSSYQSECLKYFRPQSLIWTNFEE
DHLDRYTSMEEYFEAKWRLVDQLARPSLVVGESVVRWAEKFGKTLPSFTRVVRREDKLGG
PPATSPFQSYPQQENYRLVRAFWEKEGMNLNALEASASQFRLPRHRLQLVSEWGGVEYWN
DSKATNYASALAALKTFKDPVCWIGGGKSKGGDLQAFAQAVAGQIDSAILIGETAPALAE
QMAAAKVPCQVCKTLPEAVAATRNRVKTPGVVLLSPGFSSLDMFENYTQRGFAFEQAVLS
LKKQMATDTNSACAKTGEKSS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccccgatctactcaagcccttactcgaccgacccgctgccatattcggcgcg
ggggtcagcggcgcggccgccggggacttgctgcgctcgcaggggtggctgtacgaggtg
ttcgacgagcgcggcgggcagtatgcgcatcgaaagttcggcgcgaaggaggctgcccgg
catgggctcgtcgtccacagccccggtttcccgccctcgcatccgtggtttgaggctgcc
cgcaaggccggttgcctggtactcggtgagctggactttgcctcgttgttctgggggggc
ggttgtatcgccgtgaccggtaccaatggtaagaccacggtgacggagtttctcgcctac
gctttcaagcgcgccggaaacaaggccgtggcagtgggtaacatcggctacccgatgtcg
cgactctttgagctgagcaaccacgagggcgcgctcgcggtatgcgaagtcagctcctac
cagtccgagtgcctgaagtatttccgtccgcagtcgcttatctggacgaattttgaggag
gaccatctcgaccgctacacctcgatggaggagtatttcgaggccaagtggcgactggtt
gaccagttggcccgcccgagcctcgttgtgggtgagtccgttgtccgctgggccgagaag
ttcggcaagaccttgccgtccttcacccgcgtcgttcgccgtgaggacaaactgggcggc
ccgcctgccacctcgcccttccagagctacccgcagcaggagaattaccggctcgtgcgg
gctttctgggaaaaagagggcatgaacctcaacgcgctggaggcctcggccagccagttc
cggctgccccggcaccggctgcagctcgtgtcagaatggggtggggtggagtactggaac
gactccaaggcgaccaactacgcctctgccctggctgctctgaagacttttaaggacccg
gtgtgctggatcggtggtggaaaatcgaaggggggcgacctccaggcgtttgcccaggcc
gttgccgggcagatcgactcagctattttgatcggtgagaccgcaccggctctggcggaa
cagatggccgccgccaaagtcccttgtcaggtctgtaagaccctgcccgaagccgttgcc
gcgacccgtaatcgggtaaagaccccgggtgtggtcctgctcagccccggattttcgagt
ttggacatgtttgagaactacactcagcgtggttttgcctttgagcaggcggttttgagt
ttgaagaaacaaatggccactgatacgaacagcgcatgcgcaaaaactggagaaaagtcg
tcatga
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