Rugamonas sp. DEMB1: QC826_02625
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Entry
QC826_02625 CDS
T08988
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rug
Rugamonas sp. DEMB1
Pathway
rug02024
Quorum sensing
rug03060
Protein export
rug03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
QC826_02625 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
QC826_02625 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QC826_02625 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rug02044
]
QC826_02625 (ffh)
Enzymes [BR:
rug01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
QC826_02625 (ffh)
Secretion system [BR:
rug02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
QC826_02625 (ffh)
Eukaryotic Sec-SRP protein
QC826_02625 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_31
AAA_16
AAA_30
GTP_EFTU
T2SSE
YqeC
cobW
nSTAND3
AAA_14
KTI12
AAA_33
AAA
ArsA_ATPase
Rad17
AAA_19
NTPase_1
ResIII
APS_kinase
ATP_bind_1
6PF2K
DO-GTPase1
NACHT
AAA_5
Thymidylate_kin
AAA_18
DUF5696
Motif
Other DBs
NCBI-ProteinID:
WGG51202
LinkDB
All DBs
Position
complement(568072..569439)
Genome browser
AA seq
455 aa
AA seq
DB search
MLDNLTQRLAKVVKTMRGEARLTEANTAEMLREVRLALLEADVALPAVREFIAKVKEKSM
GEEVISSLTPGQALVGVVQRELAAIMGADLGPEASQLSFAQQPPAIILMAGLQGVGKTTT
VGKLAKYLREEKKKKVLTVSADVYRPAAIAQLQSVTAQVGADFFPSTAADKPVDIALAAL
DWAKKHYHDVLIIDTAGRLGIDEEMMREIAAVHAAVKPIETLFVVDAMLGQDAINTAKAF
NDALPLTGIVLTKLDGDARGGAALSVRHITGKPIKFAGVSEKLDGLEAFDPQRMANRILG
MGDIMALVEEARKGVDTKAAAELAQKIKVGGKFDMNDFKAQLGQMKKMGGMASLVDKLPA
QFQQAAGGANMDQADKQVRRMVGIIDSMTPQERAKPELIKATRKRRIAAGAGVQVQEVNR
MLTQFEQMQTMMKKLSGGGMMKMMRSMKGMMPGMR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctagataatcttacccaacgcctcgccaaggtcgtcaagaccatgcgcggcgaggcg
cgcctgaccgaggccaacaccgcagagatgctgcgcgaagtgcgcctggccctgctcgag
gccgacgtcgccctgccggccgtgcgcgagttcatcgccaaggtcaaggaaaaatccatg
ggcgaggaggtgatctcctcgctgacgccgggccaggccctggtcggcgtggtgcagcgc
gagctggccgccatcatgggcgccgacctcggccccgaggcctcccagctcagcttcgcc
cagcagccgccggcgatcatcctgatggccggcctgcagggcgtcggcaagaccaccacc
gtcggcaagctggccaagtacctgagggaggaaaagaagaagaaggtgctgaccgtctcg
gccgacgtctaccgtcccgccgcgatcgcccagctgcaatcggtgaccgcccaggtcggc
gccgacttcttcccctccaccgccgccgacaagccggtcgacatcgccctggccgcgctg
gactgggccaaaaagcactaccacgacgtgctgatcatcgacaccgccggccgcctcggc
atcgacgaggagatgatgcgcgagatcgccgccgtgcacgccgccgtcaagccgatcgag
accctgttcgtggtcgacgccatgctcggccaggacgccatcaacaccgccaaggccttc
aacgacgcgctgccgctgaccggcatcgtgctcaccaagttggacggcgacgcccgcggc
ggcgccgccctgtcggtgcgccacatcaccggcaagccgatcaagttcgccggcgtgtcg
gaaaaactcgacggcctggaggccttcgatccgcagcgcatggccaaccgcatcctcggc
atgggcgacatcatggccctggtcgaggaggcgcgcaaaggcgtcgacaccaaggcggcc
gccgagctggcacagaagatcaaggtcggcggcaagttcgacatgaacgacttcaaggcc
cagctgggccagatgaagaagatgggcggcatggccagcctggtcgacaagctgccggcc
cagttccagcaggccgccggcggcgccaacatggaccaggccgacaagcaggtgcgccgc
atggtcggcatcatcgattcgatgacgccgcaggagcgcgccaagccggaactgatcaag
gccacccgcaagcgccgcatcgccgccggcgccggcgtccaggtgcaggaggtcaaccgc
atgctgacccagttcgagcagatgcagacgatgatgaaaaagctctccggcggcggcatg
atgaagatgatgcgctcgatgaagggcatgatgccgggcatgcgctag
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