Rugamonas sp. DEMB1: QC826_03240
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Entry
QC826_03240 CDS
T08988
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
rug
Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rug03036
]
QC826_03240 (xerD)
Chromosome and associated proteins [BR:
rug03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
QC826_03240 (xerD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Tyr_recomb_halo_M
DUF3435
Motif
Other DBs
NCBI-ProteinID:
WGG51302
LinkDB
All DBs
Position
696858..697760
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AA seq
300 aa
AA seq
DB search
MATDNPALIDEFCDSLWLEDGLSKNTLEAYRRDLRLFVRWLEVKRPGLANLHAVTTPDID
AYFAARHEETKASSSNRRLSVLKRFYQLALRQRHIAADPCLNLASAKQATRFVHTLSEAQ
VEALLAAPDVATPLGLRERTMLELMYASGLRVSELTTLKTLELSLNDGVLRITGKGAKTR
LVPFGAQARLWLERYMKEARGVILDGQVDDALFVTRRGGAMTRQMFWVLIKKHAQKAGIT
APLSPHTLRHAFATHLLNHGADLRVVQLLLGHSDISTTQIYTHVARERLKRLHAEHHPRG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagacaaccctgctctgatcgacgagttttgcgacagcctgtggctggaggac
ggcctgtcgaagaacaccctggaggcctaccggcgcgacctgcgcctgttcgtccgctgg
ctcgaggtcaagcggcccgggctggccaacctgcacgccgtgaccacgcccgacatcgac
gcctacttcgccgcgcgccacgaggagaccaaggccagctcgtcgaaccggcgcctgtcg
gtgctcaagcgcttctaccagctggcgctgcggcagcgccacatcgccgccgacccctgc
ctgaacctggcctcggccaagcaggcgacgcgcttcgtccacacgctcagcgaggcgcag
gtggaggcgctgctggcggcgcccgacgtggccacgccgctcggcctgcgcgagcgcacc
atgctggagttgatgtacgccagcgggctgcgggtgtccgagctgaccaccttgaagacc
ctggagctgagcctgaacgacggcgtgctgcgcatcaccggcaagggcgccaagacgcgg
ctggtgccgttcggcgcgcaggcgcgcctgtggctggagcgctacatgaaggaggcgcgc
ggcgtgatcctcgacggccaggtcgacgacgccctgttcgtcacccggcgcggcggggcg
atgacgcggcagatgttctgggtgttgatcaaaaagcacgcgcagaaggccggcatcacg
gcgccgctgtcgccgcacaccctgcgccacgccttcgccacccacctgttgaaccacggc
gccgacctgcgcgtcgtgcagttgcttctgggacactccgacatctcgaccacgcagatc
tacacccatgtggcgcgggaacgactgaaacgcctgcacgccgagcaccatccgcgtggc
tga
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