KEGG   Rugamonas sp. DEMB1: QC826_07560
Entry
QC826_07560       CDS       T08988                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
rug  Rugamonas sp. DEMB1
Pathway
rug03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rug00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    QC826_07560 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rug02044]
    QC826_07560 (tssM)
Secretion system [BR:rug02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   QC826_07560 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical MMR_HSR1
Other DBs
NCBI-ProteinID: WGG53414
LinkDB
Position
1654851..1658813
AA seq 1320 aa
MRRIWIFLTDRRYWAVMGFVALAVVFYFGAERLELALIWAVAGMALALLLWVVVWLARRG
YAKREAQLLGDAISSQAAAEAAAAAADPAAAPERAEVKALRENMLKAIATIRGSKLGQSS
GARALYELPWYMIIGNPAAGKSSAVTNSGLQFPIAEAKVVRGVAGTRDCDWFFTTDGILL
DTAGRYSAEEGDRAEWCGFLDLLKKYRKRAPINGIIIAVNVSELRGANPEAGIALARKLR
QRVQDLIERLEVFAPVYVLFTKADLLAGFGDFFGRAERSERERAWGATMPYKRKASSQQV
LSFFEHSFDELCAGVQELSLANMGRGRREHMAAGVFTFPIEFASLRVSLRAFLATLFEEN
AFQFKPVFRGYYFTSALQEGVPASDESLRIARRFGLKAAQEPAGEPPAQSGYFLLDLFRK
VIFADRDLVSQYASKNKLQLRYAAFFAAVVMLGVSLGGWSWSYLGNRQLVSNVRADLDKI
VKLQDRRLDLQSRLEALDILQDRIEQLDTYRRERPWSLRMGLYQGELLERKLREEYFAGA
REVMLKPVVGGLEALLAEMNANADQLRPAGRGAAAVGAVGGPLPAVATAAAMATATNAAA
ATATAAAGNAAPTPAGAPVASHEAAQAGRAPTSAEPAPGGAAAPIAAPAAAPLAASSASP
RQFLDASPTNVEDAYNALKTYLMLVDKSHAEPSHLNDQMTRYWRGWLEANRGAMPREQLI
RSAERLMTFYLGQIGDTSWPRVEPRLALVDQARENLRRVVRGMPARERVYADVRARAATR
FPGVTVARIVGEQDQALLAGSHAVAGAFTREAWEKYVNAAFKEAATHELQSADWVLKTAS
KDDLTLEGSPEQIHKGLVDLYKADYAREWLKFVQGVSVADLNGFNGAVSAMNRLGDPQSS
PIAKLLTTIYEQTSWDNPTLMNADMRQARSGAVQWVKNLFSRNAPSGLGGVNVNLQLDQS
KLDKPMGPIGREFAGVGKLVSARDKDASLMRSYMEALSKLRSRLNQLKNQGDPGPGARQF
MQQTLEGGGSELAEALRYVDEQMLTGMSDSQKQAIRPILVRPLMQTFAVIVGPAEAELNK
TWLAQVYEPFQQSLANKYPFAPNSRVEASGAEIAQFFGPDGLIAKFVGTAMGPLVVRRGD
VLAARTWADMGIVLQPQVVARFPGWIAPVGAGGVATASAAAQTVFQIQPMPAPGTLEYTV
EIDGQQLRYRNTPAQWSNMVHPSPQGAPGARITAVAFDGRSVELFNEPGQFGLKRMIDAA
AKKRKEGGVYELRWSNGAITVALDLKITSSPETSGAGAAQPQEQGFRGMRLPETIVGAGK
NT seq 3963 nt   +upstreamnt  +downstreamnt
atgcgacgaatctggattttcctgaccgaccggcgctactgggccgtgatgggctttgtc
gccctggcggtggtgttctacttcggcgccgagcggctggaactggcgctgatctgggcc
gttgccggaatggcgctggcgttgttgttgtgggtggtggtgtggttggcgcggcgcggc
tacgccaagcgcgaggcgcagctgctgggcgacgccatcagcagccaggccgccgccgag
gcggcagcggcggcggccgatccggcggcggcgccggagcgggccgaggtcaaggcgctg
cgcgagaacatgctgaaggccatcgccaccatccgtggctccaagctggggcagagctcc
ggcgcgcgcgccctgtacgagctgccctggtacatgattatcggcaacccggcggccggc
aagagcagcgccgtcaccaattccggtctgcagttccccatcgccgaggccaaggtggtg
cgcggcgtggccggcacccgcgattgcgactggttcttcaccaccgacggcatcctgctc
gacacggccggccgctattcggccgaagagggcgaccgcgccgagtggtgcggcttcctc
gacctgctgaagaagtaccgcaagcgggcgccgatcaacggcatcatcatcgccgtcaac
gtctccgagctgcgcggcgccaacccggaggccggcatagcgttggcgcgcaagctgcgc
cagcgcgtgcaggacttgatcgagcggctggaggtgttcgcgccggtgtacgtgctgttc
accaaggccgacctgctggccggcttcggcgacttcttcggccgcgccgagcgcagcgag
cgcgagcgcgcctggggcgccaccatgccctacaagcgcaaggccagcagccagcaggtg
ctcagcttcttcgagcacagcttcgacgagctgtgcgccggcgtgcaggagctcagcctg
gccaacatggggcgcggccggcgcgagcacatggcggcgggcgtgttcacttttccgatc
gagttcgccagcttgagggtgtcgctgcgcgccttcctggccaccttgttcgaggagaac
gccttccagttcaagccggtgtttcgcggctactacttcaccagcgcgctgcaggagggc
gtgccggccagcgacgagtcgctgcgcatcgcccgccgcttcggcctgaaggctgcgcag
gagccggccggggagccgccggcgcagtccggctacttcctgctcgacctgttccgcaag
gtgatcttcgctgaccgcgacctggtgtcgcagtacgccagcaagaacaaactccagctg
cgctacgccgccttcttcgccgccgtggtcatgctgggcgtgtcgctgggcggctggagc
tggtcttatttgggcaaccgccagttggtcagcaatgtgcgggccgacctggacaagatc
gtcaaactgcaggaccggcggctggacctgcagtcgcgcttggaggcgctggatatcttg
caggaccgcatagaacagctcgatacctaccggcgcgagcggccgtggtcgctgcgcatg
gggctgtaccagggcgagttgttggagcgcaagctgcgcgaggagtatttcgccggcgcg
cgcgaggtcatgctcaaaccggtggtcggcggcctggaggccctgctggccgagatgaac
gccaacgccgaccaactgcgcccggccggccggggcgcggcggccgtcggcgcggtgggc
ggcccgctgccggcggtggccacggctgctgctatggccacggctacaaatgcggctgcg
gccacggccacagccgcggctggcaacgctgcgccgacgccagccggcgcgccggtcgcg
tcgcatgaggccgcgcaagccggcagggcgcccacctcggccgagccggccccgggcggg
gcggcggccccgatcgcggccccggccgccgcaccgctggccgcctcgtcggcctccccg
cgccagttcctggacgcctcgccgaccaacgtcgaggacgcctacaacgccctgaagacc
tacctgatgctggtcgacaagtcccacgccgagcccagccacctgaacgaccagatgacg
cgctactggcgcggctggctggaggccaaccgtggcgccatgccgcgcgagcagctgatc
cgcagcgccgagcggctgatgaccttctacctgggccagatcggcgacaccagctggccg
cgcgtcgagccccggctggcgctggtcgaccaggcgcgcgagaacctgcgccgggtggtg
cgcggcatgccggcgcgcgagcgcgtctacgccgacgtgcgggcgcgcgcggcgacccgc
ttccccggcgtgacggtggcgcgcatcgtcggcgagcaggaccaggccttgctggccggc
agccacgccgtggccggcgccttcacccgcgaggcgtgggagaaatacgtcaacgccgcc
ttcaaggaggccgccacccacgagctgcaaagcgccgactgggtgttgaagaccgcctcc
aaggacgacctgacgctggagggcagcccggagcagatccacaagggcctggtcgacctg
tacaaggccgactacgcccgggagtggctgaagttcgtgcagggcgtcagcgtcgccgac
ttgaacggcttcaacggcgccgtcagcgcgatgaaccggctgggcgacccgcagtcctcg
ccgatcgccaagctgctcaccacgatctacgagcaaacctcgtgggacaacccgaccctg
atgaacgccgacatgcggcaggcccgcagcggcgcggtgcagtgggtcaagaacctgttc
tcgcgcaacgcgccgtccggcctgggcggcgtcaacgtcaacctgcagctggaccagagc
aagctcgacaagccgatggggccgatcggccgcgagttcgccggcgtcggcaagctggtc
tcggcgcgcgacaaggacgcctcgctgatgcgctcctacatggaggcgctgtccaagctg
cgcagccggctcaaccagctgaagaaccagggcgaccccggccccggcgcgcgccagttc
atgcagcagacgctcgagggcggcggctccgagctggccgaggcgctgcgctacgtcgac
gagcagatgctcaccggcatgagcgacagccagaagcaggccatccggcccatcctggtg
cggccgctgatgcagaccttcgccgtcatcgtcggcccggccgaggccgagctcaacaag
acctggctggcccaggtgtacgaacccttccagcagtcgctggccaacaagtacccgttc
gcgcccaactcgcgggtggaggccagcggcgccgagatcgcccagttcttcggcccggac
ggcctgatcgccaagttcgtcggcacggcgatggggccgctggtggtgcgccgtggcgac
gtgctggcggcgcgcacctgggccgacatgggcatcgtcctgcagccgcaggtggtggcg
cgcttccccggctggatcgcgccggtcggcgccggcggcgtggccaccgcctcggcggcg
gcgcagacggtgttccagatccagccgatgccggcgcccggcacgctggagtacaccgtc
gagatcgacggccagcagctgcgctaccgcaacacgcccgcgcagtggagcaacatggtc
catcccagcccgcagggcgcgccgggcgcgcgcatcacggcggtggccttcgacggccgc
agcgtcgagctgttcaacgagccgggccagttcggcctgaagcgcatgatcgacgccgcc
gccaagaagcgcaaggagggcggcgtctacgagctgcgctggagcaacggcgcgatcacc
gtcgcgctcgacctgaagatcaccagcagcccggagaccagcggcgccggcgccgcccag
ccgcaggagcagggcttccgcggcatgcgcctgcccgagaccatcgtcggggcgggcaaa
tga

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