KEGG   Rugamonas sp. DEMB1: QC826_07575
Entry
QC826_07575       CDS       T08988                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
rug  Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:rug00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rug02044]
    QC826_07575 (tssF)
Secretion system [BR:rug02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   QC826_07575 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WGG52035
LinkDB
Position
1660630..1662471
AA seq 613 aa
MEQLLPYYQRELAWFRENGREFGERFPGIAGELLMSGVACEDPHAERMIQGCALLTARVG
KRLDDDYPQFTETLLETLYPHYLRTFPSCSIAQLILDVAGGKDANAVVAVPRGTLMHTAQ
VAGVRCRFSTASAMTIAPVRLASVRFDPIINAPASVRLARDASAGIDITIETDEAEGWQR
LGLGQLRVFIDGEPSFCAAVRDALFMRTCGAYVDVADGGPWAALETSPIRAAGFDQEDAL
VPVAARSHPAYRLLTEYFAVPEKFNFFDIAFDQITPLLPARCRRFTLHLALRLRADASLS
RTLGGLSAHKLLLNCVPVVNLFRKAGSPVKISHTAPDYPLLADGPHPEAYEIHTVESALL
MNTGKKERTAHQLQPFYSRHHGQGAGKDVRYWVVRRDEIVAELSPGHELRVALVDHDLTP
IAIDVQTLSVEFTCSNRDLPSALAYGQPGGDMSVDGLNQTASARFLRKPSAACRFDAGNG
AHWRLISHLSLNHRSLSSVGVEEFRQMLTLYDLPRSPITQRQIQGVVGLEYKVVMAWVEG
TPCAALMPGIEVRMTLDEEAFVGGGIHLFAQVVDHFFGLYSQINVFSQLLVLSKRSGEEL
LRCPPRSGEALLA
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggagcagttgttgccctactaccagcgcgaactggcctggttccgcgaaaatggccgc
gagttcggcgagcgcttccctggcatcgccggcgagctgctgatgtccggcgtcgcctgc
gaggacccgcacgccgaacggatgatccagggctgcgcgctgctcaccgcgcgcgtgggg
aaacgcctggacgacgactacccgcagttcaccgaaaccttgctggaaacgctgtatccg
cactatctgcgcaccttcccctcgtgttcgatcgcccagctcatcctcgacgtggccggc
ggcaaggacgcgaacgccgtcgtggcggtgccgcgcggcaccctcatgcacacggcgcag
gtggccggcgtgcgctgccggttcagcaccgccagcgcgatgaccatcgccccggtacgg
ctggcgagcgtgcgcttcgaccccatcatcaacgcgcccgcctctgtgcgcctggcgcgg
gacgccagcgcgggcatcgatatcaccatcgaaacggacgaggcggagggctggcagcgg
ctgggcctcggacaattgcgcgtcttcatcgacggcgagccctcgttctgcgcggcggtg
cgcgacgccctgttcatgcgcacctgcggcgcctatgtcgatgtcgccgacggcggcccc
tgggccgcgctggagacgtcgccgatccgcgccgccggcttcgaccaggaagacgccctg
gtgcccgtcgccgcccgctcgcacccggcctaccgcctgctgacggaatacttcgccgtg
ccggaaaaattcaacttcttcgacatcgcgttcgaccaaatcacgccgctgctgccggcg
cgctgccggcgcttcacgctccatctggcgctgcggctgcgcgccgacgccagcctgtcg
cgcacgctgggcggcttgtcggcgcacaagctgttgctcaactgcgtgccggtggtcaac
ctgttcaggaaggccggctcgccggtgaaaatctcgcataccgcgccggactacccgctg
ctggcggacggcccgcatcccgaggcctacgaaatccataccgtcgagtcggcactgctg
atgaacacaggcaagaaagagcggaccgcccaccagttgcagccgttctatagccgccac
cacggccagggggccggcaaggatgtgcgctattgggtggtgcggcgcgacgagatagtg
gccgagctcagtcccggccacgaattgcgcgtcgccctggtcgaccacgacttgacaccg
atcgcaatcgacgtccaaacgctgtccgttgaattcacctgcagcaaccgcgacctgccc
agcgcgcttgcctacggccagcccggcggcgacatgagcgtcgacggcctgaaccagacc
gccagcgcccgcttcctgcgcaagccgagcgccgcctgccgtttcgacgccggcaacggc
gcccattggcggctgatctcgcacctgtcgctcaaccaccgctccctgtcgtccgtcggc
gtggaggagttccgccagatgttgacgctgtacgacctgccgcgctcgcccatcacgcag
cgccaaatccagggcgtggtcgggctggagtacaaggtcgtcatggcctgggtggagggc
acgccttgcgccgccctgatgcccggcatcgaggtgcgcatgacgctggacgaggaggcc
ttcgtcggcggcggcatccacttgttcgcccaggtggtcgaccatttcttcggcctgtac
agccagatcaatgtgttcagccaactgctggtcttgtcgaaacgcagcggagaggagttg
ctacgatgcccaccgagaagcggggaagcgctgctggcgtga

DBGET integrated database retrieval system