KEGG   Rugamonas sp. DEMB1: QC826_07630
Entry
QC826_07630       CDS       T08988                                 
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
  KO
K11893  type VI secretion system protein ImpJ
Organism
rug  Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:rug00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rug02044]
    QC826_07630 (tssK)
Secretion system [BR:rug02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   QC826_07630 (tssK)
SSDB
Motif
Pfam: T6SS_VasE
Other DBs
NCBI-ProteinID: WGG52046
LinkDB
Position
complement(1672519..1673865)
AA seq 448 aa
MSNPLKVLWGAADYLRAQQFQQQGLYHESRLRQTAHALNPFLWGVQRVEWNLDSLAANKL
EATALSAFFRSGDFADAPNSEPLPPPIDLAALPSEVQEITYHAALPMLNIDGDNVAVAGQ
HHGGARFSQVGRATSDLFTEGEVEQIRYLRKTMRLVSDREPLGAYDSFPIIKLRRTVTGG
FELDPSFVPPSVAVHSAPQLAAQLKQLMEALQAKVNALLGNMREPSRNVIEFRSGDVSSF
WLLHTASTAAATLTHYMHNPELHPERLFEALLGLAGALMTYSKSYTLSDLPKYQHNDLGR
CFGQLDTIIRELLTTVISTKCFSIALEETKPYYYGGRLDSGKIDHTTTLYLAVSAALPAL
ELVDTVPRHIKLGGPDDLERCVLSSLSGIKLVHAARVPAAIPVQPDTYYFALDNKGVLYE
QMLKAQAISLYIPDGIDDLQIELIAVTA
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgagcaatccgttgaaagtattgtggggcgccgccgattacttgcgtgctcaacaattc
cagcagcagggcctgtaccacgagtcgcgcctgcgccagaccgcccacgcgctaaacccg
ttcctgtggggcgtgcagcgggtggagtggaatctggactcgctcgcggccaacaagctg
gaggcgacggcgctgtcggcgtttttccgcagcggcgacttcgccgacgcgccgaacagc
gagcccttgccgccgccgatcgatctggccgccctgccctcggaggtgcaggagatcacc
taccacgccgccctgccgatgctcaacatcgacggcgacaacgtcgccgtggcgggccag
caccacggcggcgcgcgcttcagccaagtgggacgggccacctcggacttgttcaccgag
ggcgaggtcgagcaaatccgctacctgaggaaaaccatgcgcttggtgtccgaccgcgag
ccgctcggcgcctacgacagctttccgatcatcaagctgcgccgcacggtgacgggcggc
ttcgagctggacccaagcttcgtcccgcccagcgtggcggtgcacagcgcgccccaattg
gcggcgcaactgaaacaactgatggaagcgctgcaagccaaggtcaacgcgctgctggga
aacatgcgcgaaccgagccgcaacgtgatcgagttccgttccggcgacgtctcctcgttc
tggctgttgcataccgccagcaccgccgccgccaccttgacgcactacatgcacaacccg
gagctgcatcccgagcgcctgttcgaagcgctgctggggttggcgggcgccctgatgacc
tactccaagagctacacgctgagcgacctgcccaagtaccagcacaacgatctcggccgc
tgctttggacagctggacacgatcatccgcgagctgctcaccacggtgatctccaccaaa
tgcttttccatcgcgctggaggaaaccaagccctactactacggcggcaggctcgactcc
ggcaagatcgaccacaccaccacgctctacctggccgtcagcgccgcgctgcccgcgctc
gagctggtcgatacggtgccccgacacatcaagttgggcggaccggacgacctcgaaaga
tgcgtgttgtcgtccctgtcgggcatcaagctggtgcacgcggcgcgcgtgccggccgcc
atccccgtgcagccggacacctactacttcgcgctcgacaacaagggcgtgctctatgaa
cagatgttgaaggcacaggcgatctcgctctatattccggacggcatcgacgacctacaa
atcgaactgatcgcggtgaccgcatga

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