Rugamonas sp. DEMB1: QC826_08540
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Entry
QC826_08540 CDS
T08988
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rug
Rugamonas sp. DEMB1
Pathway
rug00300
Lysine biosynthesis
rug01100
Metabolic pathways
rug01120
Microbial metabolism in diverse environments
rug01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QC826_08540 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rug01002
]
QC826_08540 (dapE)
Enzymes [BR:
rug01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
QC826_08540 (dapE)
Peptidases and inhibitors [BR:
rug01002
]
Metallo peptidases
Family M20
QC826_08540 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WGG52207
LinkDB
All DBs
Position
complement(1866970..1868103)
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AA seq
377 aa
AA seq
DB search
MTPSRTLALTEKLIALSSVTPDDKGCQQHLIDLLAPLGFACEVIESNGVTNLWARKGATA
PLLVFAGHTDVVPTGPVEQWRSEPFNPTHRDGKLYGRGAADMKTSIAAMVVACEEFTAAH
PDHAGSIGFLITSDEEGPATDGTVIVCNLLKERGEQIDYCIVGEPTSDETLGDMIKNGRR
GSLSGRLTVLGVQGHIAYPQLARNPIHLAAPALAELVAEQWDAGNEYYLPTSWQMSNING
GTGANNVIPGEMVIDFNFRFSTASTHEGLKKRVHAILDKHGLHYELKWALSGLPFLTPRG
NLSDALSAAILAETGVMTELSTTGGTSDGRFIAQICPQVIEFGPPNASIHKIDEHIELRF
VDPLKNIYRRTLENLLR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacaccttcccgcaccctcgcgctgaccgaaaaactcatcgccctgtcctccgtgaca
cccgacgacaagggctgccagcagcacctgatcgacctgctggcgccgctcggcttcgcc
tgcgaggtgatcgagtcgaacggcgtgaccaacctgtgggcgcgcaagggcgcgaccgcg
ccgctgctggtgttcgccggccacaccgacgtggtgccgaccggcccggtcgagcaatgg
cgctccgaacccttcaacccgacccaccgcgacggcaagctgtacggccgtggcgcggcc
gacatgaagacctcgatcgccgccatggtggtggcctgcgaggagttcaccgccgcccac
cccgaccacgccggctcgatcggcttcctcatcaccagcgacgaggaaggcccggccacc
gacggcaccgtcatcgtctgcaacctgctcaaggagcgcggcgagcagatcgactattgc
atcgtcggcgagccgacctcggacgagacgctgggcgacatgatcaagaacggccgccgt
ggttcgctctcgggccgcctgacggtgctcggcgtgcagggccacatcgcctacccgcag
ctggccaggaacccgatccacctggccgcgccggcgctggccgagctggtcgccgagcag
tgggacgccggcaacgagtactacctgccgacctcgtggcaaatgtccaacatcaacggc
ggcaccggcgccaacaacgtcatccccggcgagatggtcatcgacttcaacttccgcttc
tccaccgccagcacgcacgagggcctgaagaagcgcgtccacgccatcctcgacaagcac
ggcctgcactacgagctcaaatgggcgctcagcggcctacccttcctgaccccgcgcggc
aacctgagcgacgcgctgtcggcggcgatcctggccgagacgggcgtgatgaccgagttg
tcgaccaccggcggcacctccgacggccgctttatcgcgcagatctgcccccaggtgata
gaattcgggcctcccaacgcaagtatccacaagatcgacgagcatatcgagctgcgcttc
gtcgatccgctgaagaacatctaccggcgcacgctggagaatctgctgcgctga
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