Rugamonas sp. DEMB1: QC826_08985
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Entry
QC826_08985 CDS
T08988
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
rug
Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rug03009
]
QC826_08985 (dbpA)
Enzymes [BR:
rug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QC826_08985 (dbpA)
Ribosome biogenesis [BR:
rug03009
]
Prokaryotic type
rRNA helicases
QC826_08985 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
PAS_12
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WGG52273
LinkDB
All DBs
Position
complement(1949777..1951189)
Genome browser
AA seq
470 aa
AA seq
DB search
MTTDSFSSLPLTPAFLANLDLLGYHKMTTIQEQSLPAVLEGRDLIAQAKTGSGKTAAFGI
GILHKLNPAWFATQALVLCPTRELADQVANELRRLARSAGNIKILTLTGGSPMRPQIASL
EHGAHIVVGTPGRLRDHLGRNTLDLSKVQTLVLDEADRMTDMGFYDEIAGIVSACPARRQ
TLLFSATYPDDIRRATASFLVNPLEVTVQAQHDNSQIEQRFYEIGFDQRNGAVAKLLAHF
KPVSALAFCNTKVHCRELADELRSQGFSALALYGELEQRERDEILVLFSNRSCSVLVATD
VAARGLDISNLEAVINVDVSKDTEVHIHRVGRTGRGGEKGLALSLCAPNEKKWVKLIEEY
QKAPVEWHKLDEIEDDEYAVAEPAPMMTLVVMGGKKDKLRPGDLLGALTGDAGLSKEQVG
KINVFEFMSYVALDRRVAHQAFERLAKNNPLGGDFGAIKGRNFKMRFIEA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgactacagattccttttccagcctgccgctgacgcccgccttcctggccaacctcgac
ctgctcggctaccacaagatgacgaccatccaggaacagagcctgccggcggtgctggag
ggacgcgacctgatcgcccaggccaagaccggcagcggcaagaccgccgccttcggcatc
ggcatcctgcacaagctcaacccggcctggttcgccacccaggcgctggtgctgtgcccg
acccgcgagctggccgaccaggtggccaacgagctgcgccgcctggcccgcagcgccggc
aacatcaagatcctgaccctgaccggcggctcgccgatgcgcccgcagatcgcctcgctc
gagcacggcgcccacatcgtcgtcggcacgcccggccgcctgcgcgaccacctcggccgc
aacaccctcgacctgtccaaggtgcagaccctggtgctcgacgaggccgaccgcatgacc
gacatgggcttctacgacgagatcgccggcatcgtcagcgcctgcccggcgcgccgccaa
acgctgctgttctcggccacctacccggacgacatccgccgcgccaccgcctccttcctg
gtcaacccgctcgaggtgacggtacaggcgcagcacgacaacagccagatcgagcagcgc
ttctacgagatcggcttcgaccagcgcaacggcgccgtcgccaagctgctggcccacttc
aagcccgtctcggcgctggccttctgcaacaccaaggtgcactgccgcgaactggccgac
gagctgcgcagccagggcttctccgcgctggccctgtacggcgagctggaacagcgcgag
cgcgacgagatcctggtgctgttctccaaccgcagctgctccgtgctggtggccaccgac
gtcgccgcgcgcggcctcgacatcagcaacctggaggcggtgatcaacgtcgacgtctcc
aaggacaccgaggtgcacatccaccgcgtcggccgcaccggccgtggcggcgagaagggc
ctggcgctgtcgctgtgcgcgcccaacgagaagaagtgggtcaagctgatcgaggaatac
cagaaggcgccggtcgaatggcacaagctcgacgagatcgaggacgacgagtacgccgtc
gccgagccggcgccgatgatgacgctggtggtcatgggcggcaagaaggacaagctgcgt
ccgggcgacctgctcggcgccctgaccggcgacgccggcctgagcaaggaacaagtcggc
aagatcaacgtgttcgagttcatgagctacgtcgcgctggaccgccgcgtcgcccaccag
gccttcgagcgcctggccaagaacaacccgctgggcggcgacttcggcgccatcaagggc
cgcaacttcaaaatgcgcttcatcgaagcataa
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