Rugamonas sp. DEMB1: QC826_09495
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Entry
QC826_09495 CDS
T08988
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
rug
Rugamonas sp. DEMB1
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_4
AAA_5
HTH_8
AAA_2
AAA_16
AAA
Mg_chelatase
MLTR_LBD
Xre-like-HTH
HTH_28
PAS
HTH_23
PAS_9
HTH_24
DUF2388
HTH_Tnp_ISL3
HTH_11
HTH_50
HTH_AsnC-type
HTH_22
HTH_36
Motif
Other DBs
NCBI-ProteinID:
WGG53433
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Position
2043623..2044951
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AA seq
442 aa
AA seq
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MPKRAQLQALLSYLEHEAQPMIVLDPEYNILAANTAYQRQFASVDQPYIGHKCYRISHHY
DLPCDQAGEHCPMTRVRESHGPDRVLHIHHTPRGPEHVEVELRPILNSGGEICAYVERLV
LVRSASARPSGAGLVGRSAAFNQAIAALQRVAPAMLPVLLLGESGTGKELFARAVHEASA
RAGGPFVVVDCSGLTETLFESELFGHEKGAFTGASARKQGLVETAQGGTLFLDEIGDVPL
AMQVKLLRLIETGTYRRVGGVESLRADFRLVAATHKPLERMVAEGAFRTDLYYRISAFPI
HLPALRERRDDIPLLVNSFLQHSEPGRRALAITAEAMAQLQRHDWPGNVRELRNVLERAR
LFSDDGVIRGAQLPPLGGLPLRPALAAPAALATAAVVEHGAIDGAALEQAVRDFRGTRRA
LAAHLGLSERTLYRRLKALGLA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
ctgcccaagcgcgcccagttgcaggcgctgctgtcgtatctggagcacgaggcgcagccg
atgatcgtgctcgacccggagtacaacatcctcgccgccaacaccgcctaccagcgccag
ttcgccagcgtcgaccagccgtacatcggccacaagtgctaccgcatctcgcaccactac
gatctgccctgcgaccaggccggcgagcactgcccgatgacgcgggtgcgcgagtcgcac
ggcccggaccgcgtgctgcacatccaccacacgccgcgcggaccggagcacgtcgaggtc
gagctgcgccccatcctcaacagcgggggcgagatctgcgcctacgtcgagcggctggtg
ctggtgcgcagcgcctcggcgcggcccagcggcgccggcctggtggggcgctcggcggcc
ttcaaccaggccatcgccgcgttgcagcgggtggcgccggccatgctgccggtgctgctg
ctgggcgagtccggcaccggcaaggagctgttcgcccgcgccgtgcacgaggccagcgcg
cgcgccggcggccccttcgtggtggtcgactgctccggcctgaccgagacgctgttcgag
agcgagttgttcggccacgagaagggcgccttcaccggcgccagcgcgcgcaagcagggc
ctggtggagacggcccagggcggcacgctgttcctcgacgagatcggcgacgtgccgctg
gcgatgcaggtcaagctgctgcgcctgatcgagacgggcacgtaccggcgcgtcggcggc
gtcgagagcctgcgcgccgacttccgcctggtggcggcgacccacaagccgctcgagcgc
atggtggcggagggcgccttccgcaccgacctgtactaccgcatcagcgccttcccgatc
cacctgccggcgctgcgcgagcggcgcgacgacattccgctgctggtcaactccttcctg
cagcacagcgagccgggccggcgcgcgctggccatcacggcggaggcgatggcgcagctg
cagcgccacgactggccgggcaatgtgcgcgagctgcgcaacgtgctggagcgggcgcgc
ctgttcagcgacgacggcgtgatccgcggcgcgcagttgccgccgctgggcggcctgccg
ctgcggccggcactggcggcgcccgcggcgctggcgacggcggcggtagtggagcacggc
gccatcgacggcgccgcgctggaacaagcggtgcgcgattttcgcggcacgcggcgcgcg
ctggccgcgcacctgggcctgagcgagcgcacgctgtaccggcgcttgaaggcgctgggg
ctggcgtga
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