Rugamonas sp. DEMB1: QC826_09540
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Entry
QC826_09540 CDS
T08988
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
rug
Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rug02000
]
QC826_09540
Transporters [BR:
rug02000
]
Other transporters
Pores ion channels [TC:
1
]
QC826_09540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WGG52360
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All DBs
Position
2054205..2056229
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AA seq
674 aa
AA seq
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MALSLALLLAAPARADEAADFDLSLEQLRNIKVLTATKTATPLHATPAVVSVLTADDIAR
YGYQSVAEALSHVAGFVESDDRLNHNFGVRGINAGAQSASRSIKLLLDGQPIAFRSTQQQ
WSGLELVPMSMVERIEVVRGPVSVLYGADALLGAVNVITRRDGAPRLALGREWGRDGRSA
TLLAGSGTIQFARHALVWGFQGAQEERGGLALPRISPDYARFAKTPAAPQDTSAPRSLYL
RDLWTDGRDELQTSLFWQRQDSDNVFASLNPLLRPPSHVTLEQGYLRFNYSHMLSERSTL
RASLSYGQGRPAAGDLVRTGAADYYLLRSFGYQALDGGAEWLWQPAAQSSLLLGVDLLRD
RETLESFQRHSLVDGGNFQLSAPARRTLRNSGLYAQWQFGLGQHWQAILGGRQDRHGVYG
SQRSLRAGLVGTLPGQWGLKLLGGTGFQAPSAELLYRTAVQPGDLRGNPALAPQKSKTLE
AQLSTPPSAHWNASLAVYHTKVSELVTLEQAFFNVVARNSSDSTVNGAELELRYQRGWLN
AYANLSRANTQRGVNRYTLAPLAQRPDGELFPSNSANFGASASLLEQRLLLSIDNRYVGT
RPAATANVLLANQEYRLAAYVDTTLTARWSVDKHSQLRLQVRDLRNSRYVDPGVGGIDYP
SLGRRYGLQYEYRF
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
ttggccctatcgttggcgctgttgttggccgccccggcacgcgccgacgaggcggccgat
ttcgacctcagtctggagcagctgcgcaacatcaaggtgctcaccgccaccaagaccgcc
accccgctgcacgccacgcctgccgtggtcagcgtgctcaccgccgacgacatcgcccgc
tacggctaccagagcgtggccgaggcgctgtcccacgtcgccggcttcgtcgagagcgac
gaccggctcaaccacaacttcggcgtgcgcggcatcaacgccggggcccagtcggccagc
cgctcgatcaagctgctgctggacggccagccgatcgccttccgcagcacgcagcagcag
tggagcggcctcgagctggtgccgatgagcatggtcgagcgcatcgaggtggtgcgcggg
ccggtgtcggtgctgtacggcgccgacgcgctgctcggcgccgtcaacgtcatcacccgc
cgcgacggcgcgccgcgcctggcgctggggcgcgagtggggccgcgacggccgctcggcc
acgctgctggcgggcagcggcacgatccagttcgcccggcacgcgctggtctggggcttc
cagggcgcgcaggaggaacgcggcggcctggcgctgccgcgcatctcgcccgactacgcg
cgcttcgccaagacccccgccgcgccgcaggacaccagcgcgccgcgcagcctgtacctg
cgcgacctgtggacggacgggcgcgacgagctgcagaccagcctgttctggcagcgccag
gacagcgacaacgtcttcgccagcctgaacccgctgctgcgcccgcccagccacgtcacg
ctggagcagggctacctgcgcttcaactacagccacatgctgagcgagcgcagcaccctg
cgcgccagcctcagctacggacagggccggccggccgccggcgacctggtgcgcaccggc
gccgccgactactatttgctgcgcagcttcggctaccaggcgctggacggcggcgccgag
tggctgtggcagcccgccgcgcagagcagcctgctgctaggcgtcgacctgctgcgcgac
cgcgaaacgctggagtcgttccagcgccacagcctggtcgacggcggcaatttccagctc
agcgcgccggcccggcgcacgctgcgcaacagcggcctgtacgcgcagtggcagttcggc
ctggggcaacactggcaggccatcctgggcggccggcaggaccgccacggcgtctacggc
agccagcgttcgctgcgcgccggcctggtcggcacgctgcccggacaatgggggctgaag
ctgctgggcggcaccggcttccaggcgccgtcggccgagctgctgtaccgcaccgccgtg
cagccgggcgacctgcgcggcaaccccgcgctggcgccgcagaagtcgaagacgctggag
gcgcagctgagcacgccgccgtcggcgcactggaacgccagcctggccgtgtaccacacc
aaggtcagcgagctggtgacgctggagcaggccttcttcaacgtggtggcgcgcaacagc
agcgacagcaccgtcaacggcgccgagctggagctgcgctaccagcgcggctggctcaac
gcctacgccaacctgagccgcgccaacacccagcgcggcgtcaaccgctacaccctggcg
ccgctggcgcagcggcccgacggcgagctgttccccagcaacagcgccaacttcggcgcc
agcgccagcctgctcgagcaaaggctgctgctgagcatagacaaccgctacgtcggcacg
cggccggccgccaccgccaacgtgctgctggccaaccaggaataccgcctggccgcgtat
gtcgacaccacgctgacggcgcgctggagcgtcgacaagcattcacagctgcgcctgcag
gtgcgcgacctgcgcaacagccgctacgtcgaccccggcgtcggcggcatcgactatcct
tcgctgggacggcgctatgggctgcaatatgaataccgtttctag
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