Rugamonas sp. DEMB1: QC826_10090
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Entry
QC826_10090 CDS
T08988
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18901
membrane fusion protein, multidrug efflux system
Organism
rug
Rugamonas sp. DEMB1
Module
rug_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rug02000
]
QC826_10090
01504 Antimicrobial resistance genes [BR:
rug01504
]
QC826_10090
Transporters [BR:
rug02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
QC826_10090
Antimicrobial resistance genes [BR:
rug01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
QC826_10090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
CusB_dom_1
Biotin_lipoyl
PASTA
VWA_3_C
Motif
Other DBs
NCBI-ProteinID:
WGG52456
LinkDB
All DBs
Position
2181473..2182735
Genome browser
AA seq
420 aa
AA seq
DB search
MKNIKQLTVAARPLAAAMALAGLAAFGLSGCDTATGKTAEAPAAGGPPISAAVVVEKQIT
ETQEFSGRIEAVERVEIRSRVSGFITAVNFKPGSEVKKGDVLFVIDPRPYQAEMNRAEAA
ASSARAKADLAKLELSRAEKLLADKAIAQREYDEKASGLKELDANARAASAQFEAAKLNL
NYTQVQSPINGRVSKAEITVGNLIDGAAILTSVVSTDRIYASFEGDEDTFLRVGAQSHKG
EAVIVKVGLANESGYPHEGKLDFVDNQLDPQTGSVRMRATFANVDNALVPGLFARVQLGA
GNGGKEVTSALMINERAVGTDQNRKFVFVVGADGKAEYRPVKLGQTIEGMRVVREGLKAG
EKIVVNGLQRVRPGAPVTAQTVAMDFDPTAPATTPDSKPAAKTEAKDAKVAAKAATTTKE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacattaaacaattgaccgtcgcggcaaggcctttggccgccgccatggcgctg
gcgggactggccgcattcggcctttcgggttgcgacacggccaccggcaagacggcggaa
gcgccggccgccggcggtccgccgatctccgccgccgtggtggtggaaaagcagatcacc
gaaacgcaggagttctccggccgcatcgaggccgtcgagcgggtcgagatccgttcgcgc
gtcagcggcttcatcaccgccgtcaacttcaagccgggcagcgaagtcaaaaagggcgac
gtgctgttcgtcatcgatccgcgtccctaccaggccgagatgaaccgcgccgaggcggcc
gcctcgtcggcccgcgccaaggccgacctggccaagttggagctgtcgcgcgccgagaag
ctgttggccgacaaggccatcgcccagcgcgagtacgacgagaaggcctccggcctgaag
gagctcgacgccaacgcccgcgccgcctcggcccagttcgaagcggccaagctgaacctg
aactacacccaggtgcagtcgcccatcaacggccgcgtcagcaaggccgagatcaccgtc
ggcaacctgatcgacggcgccgccatcctcacctcggtggtctcgaccgaccgcatctac
gccagcttcgagggcgacgaggacaccttcctgcgcgtcggcgcccagtcgcacaagggc
gaggcggtgatcgtcaaggtcggcctggccaacgagagcggctacccgcacgaaggcaag
ctcgacttcgtcgacaaccagctcgacccgcagaccggcagcgtgcgcatgcgcgccacc
ttcgccaacgtcgacaacgcgctggtgccgggcttgttcgcccgcgtccagctgggcgcc
ggcaacggcggcaaggaggtcaccagcgcgctgatgatcaacgagcgcgccgtcggcacc
gaccagaaccgcaagttcgtcttcgtcgtcggcgccgacggcaaggccgaataccgtccg
gtcaagctgggccagaccatcgagggcatgcgcgtggtgcgcgagggcctgaaggccggc
gagaagatcgtcgtcaacggcctgcagcgggtgcgccccggcgcccccgtcacggcgcaa
accgtggccatggatttcgatccgaccgcccccgccaccacgccggatagcaagcccgcc
gccaaaaccgaggcgaaagacgccaaggtcgcggccaaggcggcgacgaccaccaaggaa
taa
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