Rugamonas sp. DEMB1: QC826_11050
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Entry
QC826_11050 CDS
T08988
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
rug
Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rug02000
]
QC826_11050
Transporters [BR:
rug02000
]
Other transporters
Pores ion channels [TC:
1
]
QC826_11050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
TonB_dep_Rec_b-barrel
VirE1
Motif
Other DBs
NCBI-ProteinID:
WGG52625
LinkDB
All DBs
Position
2398152..2400125
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AA seq
657 aa
AA seq
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MFQEKICARWVKLALALLSTHTVAVAQAQEPLEAAKPAAKMERVEITGSNIKRIAQEGVS
PMTLISKEDIQRSGATSVLDVLRNLPSVGGNGRDFGGGNDFRNGASTATLRGMPTLILLN
GNRLPVSGSDDSNGFTSVDLNMLPLAAIERIEVLKDGASAIYGTDAVGGVINFIMRQNYQ
GVDLNASYGATTLGGGDVRKLSVAGGFGDRATQKFNLTYAAMVEDTKRIKGTERDWANHI
DFGARGGLQYANVYGAHGTDAGTLSIGGNRFADPECLAGSKLPYPSGAEWFPSPTRNGCL
SATAEFTDLVKPSRRLGATAALNWDIAPELTLFANAFFTSFDKRIVGQSSWLQNRARNNL
VIPASNPFNTYGKPVTVRRDFPVYEGGIKTKVDNLWLLTGLKGELGGWDWSATLSHGEES
GRSDTLGAYKLEELNKAVDEGRFNPFGVNRNSDALIRELSGEMYVKTRSKSDSVKVQAST
EFGELPGGKIGVSLGAELRRNSLAYTPSQDWQQGLLGQYAVLPPIAGSEKLSAVYAELNL
PLLKTLEAQAAVRHDKYELAGGTTNPKLGLKWAPSKALMLRANYSTGMVAPSLPQRFSEG
RDSFLPTKARTAASRAMCTSIPSAPVTSRRPTSAPRICSRRSRPSTTSVSSSSRSRT
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggaaaaaatttgcgcgcgctgggtgaagttggcgctggctttgttgtcgacc
cacaccgtggcggtggcccaggcgcaggagccgctggaggcggccaagccggcggccaag
atggagcgggtggaaatcaccggcagcaacatcaagcggatcgcgcaggagggcgtctcg
ccgatgaccttgatcagcaaggaggacatccagcgctccggcgccacctcggtgctcgac
gtgttgcgcaacctgccttcggtgggcggcaacggccgcgatttcggcggcggcaacgac
ttccgcaacggcgccagcacggccaccctgcgcggcatgccgaccttgatcctgttgaac
ggcaatcgtctgccggtgtccggttcggacgactccaacggcttcacctcggtggacttg
aacatgctgccgctggcggcgatcgagcgcatcgaggtgctcaaggacggcgcctcggcg
atctacggcaccgacgcggtgggcggcgtgatcaacttcatcatgcggcagaactaccag
ggcgtcgacctgaacgccagctacggcgccaccacgctgggcggcggcgatgtgcgcaag
ctgtcggtggcgggcggcttcggcgaccgcgccacgcagaaattcaatctgacctacgcc
gccatggtcgaggacaccaagcgcatcaagggcaccgagcgcgactgggccaaccacatc
gacttcggcgcgcgcggcggcctgcagtacgccaacgtctacggcgcccacggcaccgac
gccggcacgctgtcgataggcggcaaccgcttcgccgacccggaatgcctggccggctcc
aagctgccctatccgagcggggccgaatggttcccctcgccgacccgcaacggctgcctg
tcggcgacggcggaattcaccgacctggtcaaaccctcgcgccgcctgggcgcgacggcc
gcgctgaactgggacatcgcgccggagctgaccttgttcgccaacgccttcttcaccagt
ttcgacaagcgcatcgtcggccagtcctcctggctgcagaaccgcgcgcgcaacaacctg
gtcatcccggcctcgaaccccttcaacacctacggcaagccggtgacggtgcggcgcgat
tttccggtctacgagggcggcatcaagaccaaggtcgacaacctctggctgctcaccggc
ctgaagggcgagctgggcggctgggactggtcggcgacgctgtcgcacggcgaggagtcg
ggccgcagcgacaccctgggcgcctacaagctggaggagttgaacaaggcggtcgacgag
ggccgcttcaatcccttcggcgtcaaccgcaattcggacgccttgatccgggagttgtcg
ggcgagatgtatgtgaagacccgcagtaaatccgattccgtcaaagtgcaggcctcgacg
gagttcggcgagctgccgggcggcaagatcggcgtctcgctcggcgccgagctgcgcagg
aattcgctggcctacacgccctcgcaggattggcagcagggcttgctgggccagtacgcc
gtgctgccgccgatcgccggttcggaaaagctgtcggccgtgtacgcggagttgaacttg
cccttgctgaagacgctggaggcccaggccgccgtgcgccacgacaaatacgagctggcc
ggcggcaccaccaatcccaagctcggcctgaagtgggcgccgagcaaggcgctcatgctg
cgcgcgaactacagcaccggcatggtcgcgccgtcgctgccgcagcgcttcagcgaaggc
cgcgactccttcctgccgaccaaggcccgcaccgctgcgtcgagggcgatgtgtacttcg
attccttctgcacccgttacgtcaaggcgtccaacgtcggcaccaagaatctgcagccgg
agaagtcgacccagtacaacctcggtttcgtcatcgagccgctcaaggacctga
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