KEGG   Rugamonas sp. DEMB1: QC826_11870
Entry
QC826_11870       CDS       T08988                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rug  Rugamonas sp. DEMB1
Pathway
rug00061  Fatty acid biosynthesis
rug00071  Fatty acid degradation
rug01100  Metabolic pathways
rug01212  Fatty acid metabolism
rug02024  Quorum sensing
rug04146  Peroxisome
Module
rug_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rug00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    QC826_11870
   00071 Fatty acid degradation
    QC826_11870
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    QC826_11870
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    QC826_11870
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rug01004]
    QC826_11870
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rug04147]
    QC826_11870
Enzymes [BR:rug01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     QC826_11870
Lipid biosynthesis proteins [BR:rug01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   QC826_11870
Exosome [BR:rug04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   QC826_11870
  Exosomal proteins of breast cancer cells
   QC826_11870
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: WGG52771
LinkDB
Position
2607559..2609286
AA seq 575 aa
MDQARKQASDKLWLDSYPAGIPFEVDVHRFANLIDMLDAACARFPQHVAFSNQGSSITYA
ELDTLSRRFAGYLQHDVGLLKGERVAIMLPNLLQYPVVLFGVLRAGGVVVNTNPLYTGRE
LLYQLNDSGASCIVVLENFAHTLEQVVHSSALRSVITSQVGDLLNFPRAQLTNFVLRHVR
HMVPDWHMAEARPLPKALHEGERVALRPVALAPDDLAFLQYTGGTTGTPKGAMLSHANLV
ANVLQTSAWIGNVMRDGEETAILPLPLYHVFALMGMLTFLHLGANSVLVTDPRDMPGFVH
LLRHTKASAIIGVNTLFKALLNTPGIAQAAEHRLKLTIAGGMAVQRVVADKWQDVFGAPI
VEGYGLTESSPIATANRLDLAEYTGSIGLPLPSTEVAILDDDGGELAQGEVGEIAVRGPQ
VMRGYWKRPDDSAAVLTADGWLRTGDIGVMDPRGYVKLLDRKKDVIIVSGFKVFPNEVED
VAVACPGVLEAVAVGAADERSGEVVKLVVLRQDATLDADTLLAHCKRNLTGYKVPKYVVF
REQPLPKSAVGKILRRLVQAETNAPTAAPAPQSVN
NT seq 1728 nt   +upstreamnt  +downstreamnt
atggatcaagcaaggaagcaagcaagcgacaagctttggctggacagctaccccgccggc
ataccgttcgaggtcgatgtgcaccgcttcgccaacctcatcgacatgctggacgccgcc
tgcgcccgcttcccgcagcatgtcgccttcagcaaccagggcagcagcatcacctacgcc
gagctggacacgctgtcgcgccgcttcgccggctacctgcagcacgacgtcggcctgctc
aagggcgagcgggtcgccatcatgctgcccaacctgctgcagtacccggtggtgctgttc
ggcgtgctgcgcgccggcggcgtggtggtcaacaccaaccccttgtacaccgggcgcgag
ctgctgtaccagctgaacgactccggcgccagctgcatcgtggtgctggagaacttcgcc
cacacgctcgagcaggtggtgcacagcagcgcgctgcgcagcgtgatcaccagccaggtc
ggcgacctgctgaacttcccgcgcgcccagttgaccaatttcgtgctgcgccatgtgcgc
cacatggtgccggactggcacatggccgaggctcggccgctgcccaaggcgctgcacgag
ggcgagcgcgtcgccctgcggccggtggcgctggcgccggacgacctggccttcctgcag
tacaccggcggcaccaccggcacgcccaagggcgccatgctgagccacgccaacctggtg
gccaacgtgttgcagacctccgcctggatcggcaacgtgatgcgggacggcgaggagacg
gcgatcctgccgctgccgctgtaccacgtcttcgcgctgatgggcatgctcaccttcctc
cacctgggcgccaacagcgtgctggtgaccgacccgcgcgacatgcccggcttcgtccac
ctgctgcgccacaccaaggccagcgccatcatcggcgtcaacacgctgttcaaggcgctg
ctcaacacgcccggcatcgcgcaggcggccgagcaccgcctcaagctgaccatcgccggc
ggcatggcggtgcagcgcgtggtcgccgacaagtggcaggacgtgttcggcgcgcccatc
gtcgagggctacggcctgaccgagtcctcgccgatcgccaccgccaaccggctcgacctg
gccgagtacaccggcagcatcggcctgccgctgccgtcgaccgaggtggccatcctcgac
gacgacggcggcgagctggcgcagggcgaggtcggcgagatcgccgtgcgcggcccgcag
gtgatgcgcggctactggaagcggcccgacgacagcgccgccgtgctcaccgccgacggc
tggctgcgcaccggcgacatcggcgtgatggacccgcgcggctacgtcaagctgctcgac
cgcaaaaaggacgtcatcatcgtctccggcttcaaggtattccccaacgaggtcgaggac
gtcgccgtcgcctgtcccggcgtgctcgaggcggtggccgtcggcgccgccgacgagcgc
tccggcgaggtggtcaagctggtcgtgctgcgccaggacgccacgctcgacgccgacacc
ctgctggcccactgcaagcgcaacctgaccggctacaaggtgccgaagtacgtggtgttc
cgtgaacagccgctgcccaagtcggcggtcggcaagatcctgcgccgcctggtgcaggcc
gaaacgaacgcgccgactgcggcgccagcgccgcagtcggtcaattag

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