Rugamonas sp. DEMB1: QC826_12240
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Entry
QC826_12240 CDS
T08988
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rug
Rugamonas sp. DEMB1
Pathway
rug03030
DNA replication
rug03430
Mismatch repair
rug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QC826_12240 (dnaQ)
03430 Mismatch repair
QC826_12240 (dnaQ)
03440 Homologous recombination
QC826_12240 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rug03032
]
QC826_12240 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rug03400
]
QC826_12240 (dnaQ)
Enzymes [BR:
rug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QC826_12240 (dnaQ)
DNA replication proteins [BR:
rug03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QC826_12240 (dnaQ)
DNA repair and recombination proteins [BR:
rug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QC826_12240 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Big_12
Motif
Other DBs
NCBI-ProteinID:
WGG52839
LinkDB
All DBs
Position
2687266..2687976
Genome browser
AA seq
236 aa
AA seq
DB search
MRQIVLDTETTGINPKLGNRILEIGCVELKNRMLTGNNFHAYINPERDSEEGALNVHGLT
TEFLRDKPKFHEIVEQLRSYIAGAEVIIHNAPFDLGFLNHEFKRLNLPSFSEHIGGVIDT
LVQAKELHPGKRNSLDALCDRYGVSNSHRKLHGALLDAELLADVYLSMTRGQNSLGMDVE
EEADAGGALLEPIPLADIIFQPADADELAAHEATLSGLDKAVKGSCIWRATLAPQG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaaatcgtactcgataccgaaaccaccggcatcaaccccaagctgggcaaccgc
atcctcgagatcggttgcgtcgagctgaaaaaccgtatgttgacggggaataatttccac
gcctacatcaatcccgagcgcgactcggaagagggcgcgctgaacgtccacggcctgacc
accgagttcctgcgcgacaagccgaagttccacgagatcgtcgagcagttgcgcagctac
atcgccggcgccgaggtgatcatccacaacgcgcccttcgatctgggctttttgaaccac
gagttcaagcgcctcaacctgcccagcttcagcgagcacatcggcggcgtgatcgacacc
ttggtgcaggccaaggagctgcatccgggcaagcgcaactcgctcgacgcgctgtgcgac
cgctacggcgtgtccaactcgcaccgcaagctgcacggcgcgctgctcgacgccgagctg
ctggccgacgtctacctgtcgatgacgcgcggacagaacagcctgggcatggacgtcgag
gaggaggccgacgccggtggcgcgctgctcgagccgatcccgctggccgacatcatcttc
cagccggccgatgccgacgagctggcggcccacgaggccacgctgagcgggctggacaag
gccgtcaagggcagttgcatctggcgggcgacgctggcgccgcagggctga
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