Rugamonas sp. DEMB1: QC826_12310
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Entry
QC826_12310 CDS
T08988
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
rug
Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rug02000
]
QC826_12310
Transporters [BR:
rug02000
]
Other transporters
Pores ion channels [TC:
1
]
QC826_12310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WGG52849
LinkDB
All DBs
Position
2716461..2718569
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AA seq
702 aa
AA seq
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MKYSIQLTPLALAICLAHPALAQSQAVSGTVSGTMPEVRVVGQAMPQPLAGSDSSQLLSN
VAGYNVAAGGGVSGLPVMNGFADDRLKIRIDGMEVSSACANHMNAPLSYIAPKQVGKIRM
LAGLTPVSMGGDSIGGSIEVESAPAEFADAPGLLRSSGSVSLGARSVDRSVSAALSAGVA
NERLSIAYSGNRVRANSYRDGNGDQVRDSLYKSTNQSLTMAAQGGGQLLTLRLGTQRIPY
QGFPNQYMDMTRNHADFANLNYNGALAWGKLDARLYWQRTEHDMGFFSAERAGKMPMLTE
GRDRGYAVKAELPLAAGGALRLGHEYHSFRLEDYWPSVPGAMMMSPLVYLNIHDGKRDRV
VLFAEWDQAVNAQWSTQLGLRGERVNSDAGQVQPYNYTMMNAADVDAAKLFNSRGHARRD
NNVDLTALARYEAGAGASYEFGYARKTRSPNLYERYTWGRGTMAMRMINWFGDGNGYVGN
LDLNPEVAHTLSASADWHDAARQRWSVKVTPYFSFVRDYVDADAIGSFNPYGVKTASGRL
LRFANHDARLYGVNLAWNLALAQDARFGKLALKGTASITRGERTDGLDLYRMMPFNASVA
LEQAQGAWHNTLEAKLVGRKHLVDSQRLEPETGAYAVFNARAQYQAGRNVSLSAGVGNLF
NRYYADPMGGVDLAGMAASRSGTLRALPGYGRSFDLGLTYSF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaaatactccatccaactgaccccgctcgccctcgccatttgcctggcccatcccgcg
ctggcgcagagccaggccgtgtccggcaccgtgtccggcaccatgccggaggtgcgcgtg
gtcggccaggcgatgccgcagccgctggccggcagcgacagcagccagctgctgtccaac
gtggccggctacaacgtggcggccggtggcggcgtgtccggcctgccggtgatgaacggc
ttcgccgacgaccgcctgaagatccgcatcgacggcatggaagtgagctcggcctgcgcc
aaccacatgaacgcgccgctgtcctacatcgcgcccaaacaagtcggcaagatccgcatg
ctggccggcctgacgccggtgagcatgggcggcgacagcatcggtggcagcatcgaggtc
gagtcggcgccggccgagttcgccgacgcgcccggcctgctgcgcagcagcggcagcgtg
tcgctgggcgcgcgcagcgtcgaccgcagcgtctcggcggcgctgagcgccggcgtcgcc
aacgagcgcctgagcatcgcctacagcggcaaccgggtgcgcgccaacagctaccgcgac
ggcaacggcgaccaggtgcgcgacagcctctacaagagcaccaaccagagcctgaccatg
gcggcgcagggcggcggccagctgctcacgctgcgcctgggcacccagcgcatcccctac
caaggcttccccaaccagtacatggacatgacgcgcaaccatgccgatttcgccaacctg
aactacaacggcgcgctggcctggggcaagctggacgcccgcctgtactggcagcgcacc
gagcacgacatgggcttcttcagcgccgagcgggccggcaagatgccgatgctgaccgag
ggccgcgaccgtggctacgccgtcaaggccgagctgccgctggcggccggcggcgccctg
cgcctgggccacgagtaccacagcttccgcctcgaggactactggccgtccgtgccgggc
gcgatgatgatgtcgccgctggtctacttgaacatccacgacggcaagcgcgaccgcgtc
gtcctgttcgccgagtgggaccaggccgtcaacgcgcagtggagcacccagctcggcctg
cgcggcgagcgcgtcaacagcgacgccggccaggtccagccctacaactacacgatgatg
aacgccgccgacgtcgacgccgccaagctcttcaacagccgcggccacgcccgccgcgac
aacaacgtcgacctgaccgcgctggcccgctacgaggccggcgccggcgccagctacgag
ttcggctacgcccgcaagacccgctcgcccaacctgtacgagcgctacacctggggccgt
ggcaccatggcgatgcggatgatcaactggttcggcgacggcaacggctacgtcggcaac
ctcgacctcaaccccgaggtggcgcacaccctcagcgccagcgccgactggcacgacgcg
gcgcgccagcgctggagcgtcaaagtgacgccgtacttcagcttcgtgcgcgactacgtc
gacgccgacgccatcggcagcttcaacccctacggcgtgaagacggccagcggccggctg
ctgcgcttcgccaaccacgacgcccgcctgtacggcgtcaacctggcgtggaacctggcg
ctggcgcaggacgcccgcttcggcaagctggcgctgaagggcacggccagcatcacccgt
ggcgagcgcaccgacggcctcgacctgtaccgcatgatgccgttcaacgccagcgtcgcc
ctcgaacaggcgcagggcgcctggcacaacacgctcgaggccaagctggtcggccgcaag
cacctggtcgacagccagcgcctggaaccggaaaccggcgcctacgccgtgttcaacgcc
cgcgcgcagtaccaggccgggcgcaacgtcagcctgtcggccggcgtcggcaacctgttc
aaccgctactacgccgacccgatgggcggggtcgacctggccggcatggcggcgagccgc
agcggcaccctgcgcgcgctgcccggctacggccgttccttcgacctggggctgacttac
tccttctaa
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