Rugamonas sp. DEMB1: QC826_12675
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Entry
QC826_12675 CDS
T08988
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rug
Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rug03032
]
QC826_12675
03036 Chromosome and associated proteins [BR:
rug03036
]
QC826_12675
03400 DNA repair and recombination proteins [BR:
rug03400
]
QC826_12675
DNA replication proteins [BR:
rug03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QC826_12675
Chromosome and associated proteins [BR:
rug03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
QC826_12675
DNA repair and recombination proteins [BR:
rug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
QC826_12675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
WGG52907
LinkDB
All DBs
Position
2797728..2798000
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDHIAQSADISKAAAARALDAVIDGVTTTLQKNDSVTLVGFGTFSVSERAARTG
RNPRTKEAIQIDAAKVPKFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagactgaattgatcgaccatattgcccaatccgctgatatttcgaaagcggct
gcggcgcgcgcgctggatgcggtgatcgacggtgtaacaacaactctgcaaaagaacgac
agcgtcaccctggtcggctttggcactttctccgtgagcgaacgcgctgcccgtaccggc
cgcaatccgcgcacgaaagaagcgatccagatcgatgcagctaaggtccctaaatttaaa
gctggcaaagctttgaaggatgctgtaaactaa
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