KEGG   Rugamonas sp. DEMB1: QC826_13415
Entry
QC826_13415       CDS       T08988                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
rug  Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:rug00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rug02044]
    QC826_13415 (tssF)
Secretion system [BR:rug02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   QC826_13415 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WGG53020
LinkDB
Position
2964009..2965859
AA seq 616 aa
MKDLLPFVERELRLFGDYFSRFRERHPGIAGDLLLNGDSGGDPGIRCLTQAAAVLNARTA
KKLDDDLPELTASFLDMLAPHLLRFFPSCAVVCFDPAGGNGKRASGKTTVPRGALLKTAE
RKRDGVICKFVTAFAVPLAPISVTAAAFSPTTRAPAGTRLPPGVGAEIAVTIEWTPDASN
PSGLPVDSLRLFIDGEPSFCAALLDALFLRTVCTYVEVSDGRWLSLGTNPLAPVGLDANE
ALIPFSAKSQAAFRLLTEYFCFPAKFNFLDIQLAALATRLPSGCRWLTLHFCMAGLAEDS
NAARLLRSLDAQHLVAGCTPVVNLFKQSACPIRLDHTAQHYTLIADALNAKAYQVYGVNS
VHMVRGAGSSAEVVEFRPYYSFHHGDAGSKKGQYWIMRRDDAVAATKPGYENQLSFVDID
FNPITSPSSTVSVELTCSNGALPSRQEFGAPGGDLSTEISIGMHSIRLLRRPTVPCAPPS
GRDVQWKLASHLALSISSLSQDGLPAFREMLAMHDLVRSATSRRQIDGIVALEIEPARAW
LRDKRGSATVQGVEVRMTLDEAAFVGCGIHVFAQLMDHFLGMYVHLNSFTQLTIVSLETG
KELLKCPPRNGELNLV
NT seq 1851 nt   +upstreamnt  +downstreamnt
atgaaagacctgctgccgttcgttgagcgcgagctaagactgtttggcgactacttcagc
cgcttccgcgagcggcatcccggcatcgccggcgacttgttgctcaacggcgacagcggc
ggcgaccccggcatccgatgcctgacgcaggcggcggccgtgctcaacgccagaaccgcc
aagaagctcgacgacgacctccctgaactgaccgcctccttcctggacatgttggcgccc
caccttctgcgcttcttcccgtcctgcgctgttgtctgcttcgaccccgcagggggcaat
ggcaaacgggccagcggcaagacgacggtgccgcgcggcgccttgctcaagacggcggag
cgcaagcgcgatggggtgatctgcaagttcgtgaccgccttcgcggttccgctggccccc
atttcggtgactgcagcggcattttcgccaacgacaagggcgcccgccggcacccgcctg
ccgcccggtgtgggcgccgagatcgccgtcaccatcgaatggacgccggacgcgtccaac
ccgtccggtttgcccgtggacagcctgcgcctgttcatcgacggcgagccgtcgttttgc
gcggccctgctcgacgcgctctttttgcgcaccgtctgtacctacgtggaagtgagcgac
gggcgctggctaagccttggcacgaacccgctggcacccgtcgggctggacgcaaacgag
gcgctgatcccgttttcggcgaagtcgcaggcggcgttccgtttgctgaccgagtacttc
tgcttcccagcgaagttcaatttcctcgacatccagttggctgctctggctacacgcttg
ccttctggatgccggtggctgacgctgcatttctgtatggcggggctggctgaagatagc
aacgccgcgcgcctgctcaggtcgctcgacgcacaacacttggtcgccgggtgtacgccg
gttgtcaatttgttcaagcagtcggcctgtccgatccggctcgaccacactgcgcagcac
tacaccttgatagccgatgccctaaatgccaaggcctatcaggtctatggcgttaattcc
gtgcacatggtgcgcggcgccggcagcagcgccgaggtcgtggagtttcgtccctactat
tcgttccaccatggcgacgccggcagcaagaaagggcagtactggatcatgcggcgcgac
gacgcggtggcggcgaccaagccggggtacgaaaaccaattgtccttcgtcgacatcgac
ttcaacccgatcacatccccgtcctcgaccgtgtcggtcgaactcacctgcagcaatggc
gctctgccgagccgacaagagtttggcgcccctggcggcgacctgtcgacggagatcagc
atcggcatgcattcaatccggctactgcgcagacccaccgtgccgtgcgcgccgccatcg
ggccgcgacgttcagtggaagctcgcctcgcatcttgccctgagcatcagctccttgtca
caagacggcctgccggccttccgcgagatgctcgccatgcacgatctggtccgctcggcg
acctcgcggcggcagatcgacggcattgtcgcgttggagatcgagccagctcgcgcctgg
ctgcgcgacaagcgcggcagcgccaccgtgcaaggggtggaagtccggatgacgctcgac
gaggccgccttcgtcggctgcggcatccacgtattcgcccagctgatggaccatttcctg
gggatgtatgttcatctgaacagcttcacacaattgaccatcgtatcgctcgaaacgggg
aaggagttgctcaaatgtccaccacgcaatggggagctgaacctggtgtaa

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