Rugamonas sp. DEMB1: QC826_15775
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Entry
QC826_15775 CDS
T08988
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rug
Rugamonas sp. DEMB1
Pathway
rug00300
Lysine biosynthesis
rug00470
D-Amino acid metabolism
rug01100
Metabolic pathways
rug01110
Biosynthesis of secondary metabolites
rug01120
Microbial metabolism in diverse environments
rug01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QC826_15775
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QC826_15775
Enzymes [BR:
rug01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
QC826_15775
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WGG53507
LinkDB
All DBs
Position
complement(3493152..3494357)
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AA seq
401 aa
AA seq
DB search
MTQFAVRDDSLQLGGMALARLAERVGQTPFYAYDRAQLSERVAQLRRALPAEVHLHYAMK
ANPMPAVVQHMARLVDGLDVASGGELRVALDTPMAPLEISFAGPGKRDQELGCAIAAGCV
LNMESEQEMRRIAAIGARLGIRPLVAVRVNPDFELQRSGMSMGGGAKQFGVDAERVPAML
AEAAQLALEVRGLHIYSGSQNLSAAALAEAQDQTLALAVRLAAHWPGQLRTLNLGGGFGV
PYFPGEQRLDLDAVGRHLHGVVAAARQQLPGTRIDIELGRYLVAEAGVYVCRVIERKESR
GKVFLVTDGGLHHHLAASGNFGQVIRKNYPVVVGNRVAGGPRERVSVVGPLCTPLDLLAE
QMELAVAGPGDLVAVLQSGAYGWSASPQAFLGHPAALEVLV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
ctgacccagttcgcggtgcgcgacgacagcctgcaactgggcggcatggcgctggcacgg
ctggccgagcgggtcggccagacgccgttctacgcctacgaccgcgcccagctgagcgag
cgcgtggcgcagctgcgccgcgccctgccggccgaggtgcacctgcactacgcgatgaag
gccaacccgatgccggccgtggtgcagcacatggcgcgcctggtcgacggcctcgacgtc
gcctccggcggcgagctgcgcgtcgccctcgacacgccgatggcgccgctcgagatcagc
ttcgccggccccggcaagcgcgaccaggagctcggctgcgccatcgccgccggttgcgtg
ctcaacatggagtccgagcaggagatgcggcgcatcgccgccatcggcgcccggctcggc
atccgcccgctggtggcggtgcgcgtcaaccccgacttcgagctgcagcgttccggcatg
agcatgggcggcggcgccaagcagttcggcgtcgacgccgagcgcgtgccggccatgttg
gccgaggcggcccagctggcgttggaggtgcgcggcctgcatatttatagcggctcgcag
aacctgagcgccgccgcgctggccgaggcgcaggaccagaccctggcgctggcggtgcgc
ctggcggcgcactggccgggccagctgcgcacgctgaacctgggcggcggcttcggcgtg
ccttacttccccggcgagcagcggctcgacctggacgccgtcggccgccacctgcacggc
gtggtcgcggcggcgcgccagcaactgccgggcacccgcatcgacatcgagctgggccgc
tacctggtggccgaggccggcgtctacgtctgccgtgtgatcgagcgcaaggagtcgcgc
ggcaaggtcttcctggtcaccgacggcggcctgcaccaccacctggccgcctcgggcaat
ttcggccaggtgatccgcaagaattatcccgtggtggtcggcaaccgcgtcgccggcggg
ccgcgcgagcgcgtctccgtggtcggtccgctgtgcaccccgctcgacctgctggccgag
cagatggagctggccgtggccggccccggcgacctggtcgccgtgctgcagtcgggcgcc
tacggctggagcgccagtccgcaggccttcctcggccatccggcggcgctggaagtgctg
gtctga
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