Rugamonas sp. DEMB1: QC826_16470
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Entry
QC826_16470 CDS
T08988
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rug
Rugamonas sp. DEMB1
Pathway
rug00260
Glycine, serine and threonine metabolism
rug00630
Glyoxylate and dicarboxylate metabolism
rug00670
One carbon pool by folate
rug00785
Lipoic acid metabolism
rug01100
Metabolic pathways
rug01110
Biosynthesis of secondary metabolites
rug01200
Carbon metabolism
Module
rug_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QC826_16470 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QC826_16470 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
QC826_16470 (gcvP)
00670 One carbon pool by folate
QC826_16470 (gcvP)
Enzymes [BR:
rug01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
QC826_16470 (gcvP)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Motif
Other DBs
NCBI-ProteinID:
WGG48314
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Position
3638401..3641292
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AA seq
963 aa
AA seq
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MTRSSLTQLEARDAFIARHIGPDAAEQAAMLSTLGYASRAALIDALVPANIRNQGALPLG
QYSQPMPEQEALAKLKAIASQNKVLKSLIGQGYYNTHTPGVILRNIFENPAWYTAYTPYQ
PEISQGRLEAILNFQQVITDLTGMGISNASMLDEGTAAAEAMTLIQRVGKSKSQVFYVAD
DVLPQTREVVQTRAEPLGIEVRTFAPAELAELHDCFGVLLQYPGVNGVVRDYKDGVAAVK
AKGAMVVVAADLLALTVLTPPGEWGADVVVGNSQRFGVPLGFGGPHAGYLSTRDEFKRSM
SGRLVGVTIDAQGNKAYRLALQTREQHIRREKATSNICTAQVLLAVIASMYAVYHGPAGL
KQIALRVHRYTGILAANLAALGYEISNATYFDTLTVKTDNAEALLATAVANGVNLRKVDA
HHVGVSLDETTSRDDLELLWTIFAHGVKGAAKADFDLVEANVQQAFPAALERSSAYLSHP
VFNRYHSETEMLRYLRSLADKDLALDRTMIPLGSCTMKLNATSEMIPVTWPEFSNIHPFA
PDAQTVGYREMIVQLEDMLCALTGYAAVSLQPNAGSQGEYAGLLVIKAYHESRGEGHRNI
CLIPSSAHGTNPASANMVGMQVVVTACDARGNVDLADLKAKAELHSKNLACVMVTYPSTH
GVFEEGIQELCAIIHGHGGQVYIDGANMNALVGVAAPGSFGGDVSHLNLHKTFCIPHGGG
GPGVGPIGVGAHLAKFLPNQRSSGYQRDVAGIGAVSAAPYGSASILPISWMYIAMMGAEG
LTAATETAILAANYIARRLSPHYPVLYSGHDGLVAHECILDLRPLTDATGISNEDVAKRL
MDFGFHAPTMSFPVPGTLMIEPTESESKAEIDRFIDAMVAIRMEIAKVENGEFDREDNPL
KHAPHTAEVLTADKWERKYSREVAAFPLPSLRKQKYWPSVGRADNVYGDRNLMCGCAPMS
DYE
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgacccgctccagcctgacccaacttgaagcccgcgatgccttcatcgcccgccacatc
ggccccgacgcagcagaacaagcggcgatgctgtcgaccctcggctacgcctcgcgcgcc
gcgctgatcgacgccctcgtccccgccaacatccgcaaccagggcgcgctgccgctgggc
cagtactcgcagccgatgcccgagcaggaggcgctggccaagctgaaggccatcgcgtcg
cagaacaaggtgctcaagtcgctgatcggccagggctactacaacacccacacgcccggc
gtcatcctgcgcaacatcttcgaaaacccggcctggtacaccgcctacacgccgtaccag
ccggagatctcgcagggccgcctggaagccatcttgaacttccaacaggtcatcaccgac
ctgaccggcatgggcatctccaacgcctccatgctcgacgagggcaccgccgccgccgag
gcgatgacgctgatccagcgcgtcggcaagtccaagtcgcaggtgttctacgtcgccgac
gacgtgctgccgcaaacccgtgaagtggtgcagacccgcgccgagccgctcggcatcgag
gtgcgcaccttcgccccggccgaactggccgagctgcacgactgcttcggcgtgctgctg
caataccccggcgtgaacggcgtggtgcgcgactacaaggacggcgtcgccgccgtcaag
gccaagggcgcgatggtggtcgtcgccgccgacctgctggcgctgaccgtgctgaccccg
ccgggcgaatggggcgccgacgtcgtcgtcggcaacagccagcgcttcggcgtgccgctc
ggtttcggcggcccgcacgccggctacctgtcgacccgcgacgaattcaagcgcagcatg
tccggccgcctggtcggcgtcaccatcgacgcccagggcaacaaggcctaccgcctggcg
ctgcaaacccgcgagcagcacatccgccgcgaaaaagccacctccaacatctgcaccgcg
caggtgctgctggcggtgatcgcctcgatgtacgccgtctaccacggcccggccggtctg
aaacagatcgccctgcgcgtgcaccgctacaccggcatcctggccgccaacctggccgcg
ctcggctacgagatcagcaacgccacctacttcgacacgctgaccgtcaagaccgacaac
gccgaggcgctgctggccaccgccgtcgccaatggcgtcaacctgcgcaaggtcgacgcc
caccacgtcggcgtctcgctcgacgagaccaccagccgcgacgacctggaactgctgtgg
accatcttcgcccacggcgtcaagggcgccgccaaggccgacttcgacctggtcgaggcg
aacgtgcagcaggccttcccggccgcgctggagcgcagcagcgcctacctgagccacccg
gtgttcaaccgctaccactccgaaaccgaaatgctgcgctacctgcgcagcctggccgac
aaggacctggcgctggaccgcaccatgatcccgctcggctcctgcaccatgaagctgaac
gccaccagcgagatgatcccggtcacctggcccgagttctccaacatccacccgttcgcg
cccgatgcgcaaaccgtcggctaccgcgagatgatcgtccagctggaagacatgctgtgc
gcgctgaccggctacgccgccgtctcgctgcagcccaacgccggttcgcagggcgagtac
gccggcctgctggtgatcaaggcctaccacgagtcgcgcggcgaaggccaccgcaacatc
tgcctgatcccctcgtcggcgcacggcaccaacccggcctcggccaacatggtcggcatg
caggtggtggtcaccgcctgcgacgcgcgcggcaacgtcgacctggccgatctgaaggcc
aaggccgagctgcactcgaagaacctggcctgcgtgatggtcacctacccgtcgacccac
ggcgtgttcgaggaaggcatccaggagctgtgcgcgatcatccacggccacggcggccag
gtctacatcgacggcgccaacatgaacgcgctggtcggcgtggcggcgccgggcagcttc
ggcggcgacgtctcgcacctgaacctgcacaagaccttctgcatcccgcacggcggcggc
ggcccaggcgtcggcccgatcggcgttggcgcccacctggccaagttcctgcccaaccag
cgctccagcggctaccagcgcgacgtcgccggcatcggcgcggtcagcgccgcgccttac
ggctcggccagcatcctgccgatctcgtggatgtacatcgcgatgatgggcgcggagggt
ttgaccgccgccaccgaaacggcgatcctggcggccaactacatcgcccgccgcctgtcg
ccgcactacccggtgctgtactcgggccacgacggcctggtcgcccacgagtgcatcctg
gatctgcgtccgctgaccgatgccaccggcatcagcaacgaggacgtcgccaagcgcctg
atggacttcggcttccacgccccgaccatgagcttcccggtgccgggcacgctgatgatc
gagccgaccgagagcgaatcgaaggccgagatcgaccgcttcatcgacgccatggtcgcc
atccgcatggagatcgccaaggtggagaacggtgaattcgaccgcgaggacaatccgctc
aagcacgcgccgcacaccgccgaggtgctcaccgccgacaagtgggaacgcaagtacagc
cgcgaggtggcggccttcccgctgccgtcgctgcgcaagcagaagtactggccgtcggtc
ggccgcgccgacaacgtctacggcgaccgcaacctgatgtgcggttgcgcgccgatgagc
gactacgagtaa
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