KEGG   Rugamonas sp. DEMB1: QC826_18115
Entry
QC826_18115       CDS       T08988                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
rug  Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:rug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rug03000]
    QC826_18115
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rug02048]
    QC826_18115
Transcription factors [BR:rug03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    QC826_18115
Prokaryotic defense system [BR:rug02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    QC826_18115
SSDB
Motif
Pfam: HTH_3 BetR UQCC2_CBP6
Other DBs
NCBI-ProteinID: WGG48587
LinkDB
Position
complement(3980442..3980864)
AA seq 140 aa
METLVDRDLVAEITSRYQALSSLVPLHAIRNEEDYIGAVFALNQLLDAGAANDGHPLADL
VNALANLVSNYDEQHYPLEQITPVAMIRFLMEQHRLSQSDLPEIGGQSVVSEVLNGKREL
NVRQIKRLSERFNVPASVFL
NT seq 423 nt   +upstreamnt  +downstreamnt
atggaaactctagtggaccgagacctggttgcggagattacttcgcgctatcaagccctg
tcgtcgcttgttccgttgcatgccattcgtaacgaggaagactacataggcgccgtgttc
gcgttgaaccaactgctggatgccggagcggcgaatgacgggcatccgcttgccgacttg
gtcaatgcgctggctaatctcgtcagcaattatgacgagcagcactatccgcttgagcaa
attacaccagttgcgatgatccgatttttgatggaacaacatcgactctcccagtccgat
ttgcctgaaattggtggccagagcgtggtttctgaggtgctgaatggcaagcgggagctg
aacgtgcggcagattaaaaggttgtcggagcgcttcaatgtgccggcaagcgtcttcctg
tag

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