KEGG   Rugamonas sp. DEMB1: QC826_19120
Entry
QC826_19120       CDS       T08988                                 
Name
(GenBank) endonuclease
  KO
K05984  excinuclease Cho [EC:3.1.25.-]
Organism
rug  Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:rug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rug03400]
    QC826_19120
DNA repair and recombination proteins [BR:rug03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QC826_19120
SSDB
Motif
Pfam: GIY-YIG
Other DBs
NCBI-ProteinID: WGG48756
LinkDB
Position
complement(4181727..4182626)
AA seq 299 aa
MRTHVSSVGLLIHGDPALSFSYPEHIERASLDALPSQPGVYLFRDEAGVAIYVGKSVNVR
GRVLSHLRTPDESQMLQRTRRVDFERCGGELGALLRESRLIKQLQPVFNQKLRRLREMCS
WRLDGGAPQLVFARDCDFAATEGLHGLYGSRASAQQALRELADAHGLCAGVLGLEPLARG
RPCFARQLGRCGGACVGVEVAQHAARVSAALLPWRVAPWPYAGPVGIVEESDGLRQVQLV
DRWCYLGPRPAGRKRAPPRAAAQFDIDVYQILAKPLLRGGLTLELLSEPLGDRLPRCCE
NT seq 900 nt   +upstreamnt  +downstreamnt
atgcgcacccatgtcagctcggtcggcctgttgatccacggcgatccggccctttccttc
agttatcccgagcacatcgagcgcgccagcctggacgccttgcccagccagcccggcgtc
tacctgttccgcgacgaggccggcgtcgccatctacgtcggcaagagcgtcaatgtgcgc
ggccgcgtgctcagccatttgcgcacgccggacgagagccagatgctgcaacgcacccgc
cgggtcgacttcgagcgctgtggcggcgagctcggcgcgctgctgcgcgagtcgcggctg
atcaaacagttgcagccggtgttcaaccaaaagctgcgccgcctgcgcgaaatgtgctcg
tggcggctggacggcggcgcgccgcagctggtgttcgcgcgcgactgcgatttcgccgcc
accgagggcctgcacggactgtacggcagccgggccagcgcgcagcaggcgctgcgcgag
ctggccgacgcgcacggcctgtgcgccggtgtgctgggcctggagccgctggcgcgcggc
cggccctgtttcgcgcggcaactggggcgctgcggcggcgcctgtgtcggcgtggaggtg
gcgcagcacgcggcgcgcgtcagcgccgccttgctgccgtggcgcgtggcgccgtggccg
tacgcggggccagtcggcatcgtcgaggagtcggacgggctgcgccaagtgcaactggtg
gaccgctggtgctatctcggtccgcgcccggcgggccgcaagcgggcgccgccgcgcgcc
gcggcgcagttcgacatcgatgtgtaccagattctcgccaagccgctgttgcggggcggc
ttgacgctggagctgctcagcgagccgcttggcgatcgcttgccaaggtgttgcgaataa

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