Rugamonas sp. DEMB1: QC826_21985
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Entry
QC826_21985 CDS
T08988
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K22108
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
rug
Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rug03000
]
QC826_21985
Transcription factors [BR:
rug03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
QC826_21985
SSDB
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Paralog
GFIT
Motif
Pfam:
TetR_C_24
TetR_N
TetR_C_4
DNA_pol3_gamma3
RsbU_N
Motif
Other DBs
NCBI-ProteinID:
WGG49243
LinkDB
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Position
4776371..4777006
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AA seq
211 aa
AA seq
DB search
MQTLASPPSVLKKRGRPAKGEGGGLRAELIEKSARLFREKGYDNTTVRDIAAASGIQAGS
WFYHFKTKQDILVAIMEQGMARSLAQIEAIGEQGLAPRAALERLVEVHLHTLLAPDHDFI
AVLLYEWRSLDQPSRDRIVALKDRYEAVWDEVIGALHRSGDWAMPSRFDRLLIFGALNWT
VQWFKPGSGADVKELAQQALLFILRTPPREA
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccctcgcctctcccccctccgtgctgaaaaaacgcggacgtcccgccaagggc
gagggtggcggcctgcgcgccgagctgatcgaaaaatcggcccgcctgttccgcgaaaaa
ggctacgacaacaccaccgtgcgcgacatcgccgccgccagcggcatccaggccggcagc
tggttctaccacttcaagaccaagcaggacattctggtggcgatcatggaacagggcatg
gcgcgctcgctggcgcagatcgaggccatcggcgagcagggcctggcgccgcgcgcggcg
ctggagcggctggtcgaggtccacctgcacaccctgctggcgcccgaccacgacttcatc
gccgtgctgctgtacgaatggcgctcgctcgaccagccctcgcgcgaccgcatcgtcgcg
ctgaaggaccgctacgaggcggtgtgggacgaggtgatcggcgccctgcaccgctccggc
gactgggccatgccctcgcgcttcgaccgcctgctgatcttcggcgcgctgaactggacg
gtgcagtggttcaagccgggcagcggcgccgacgtcaaggaactggcgcagcaggcgctg
ttgttcatcctgcgcacgccgccgcgcgaggcctag
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