Rugamonas sp. DEMB1: QC826_24295
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Entry
QC826_24295 CDS
T08988
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rug
Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rug03021
]
QC826_24295 (rpoH)
Transcription machinery [BR:
rug03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QC826_24295 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
WGG49615
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Position
5285363..5286262
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AA seq
299 aa
AA seq
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MTMMSAPTALVPATNRALGLGFTGNLGNLDAYISAVNRLPMLSHDEEISLARRLQEKNDL
AAAQELVLSHLRLVVSIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPDQGVRLVSYAMH
WIKAEMHEYILKNWRLVKVATTKAQRKLFFNLRSHKTGLDAMTPPQIDALAKLLDVKREE
VIEMETRLSGRDIALESSSDDDDDKFAPIAYLSSDQNEPTKVLEAEQVTRLQSEGLETAL
GKLDPRSRRIVEARWLANDDGSGATLHTLAAEFGVSAERIRQIESAALKKMKGALAAYI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgtccgcaccgaccgccttggttcccgcaaccaaccgcgccctgggactc
ggcttcaccggcaacctgggcaacttggacgcctatatttcggccgtcaaccgcctgccg
atgctctcgcacgacgaagaaatctcgctggcccgccgcctgcaggaaaagaacgacctg
gccgccgcgcaggaactggtgctgtcgcacctgcgcctggtggtgtcgatcgcccgcggc
tacctgggctacggcctgccgcacgccgacctgatccaggaaggcaacatcggcctgatg
aaggcggtcaagcgcttcgacccggaccagggcgtgcgcctggtgtcctacgcgatgcac
tggatcaaggccgagatgcacgagtacatcttgaagaactggcgtctggtcaaggtggcc
accaccaaggcccagcgcaagctgttcttcaacctgcgcagccacaagaccggcctggac
gcgatgacgccgccgcagatcgacgcgctggccaagctgctcgacgtcaagcgcgaggaa
gtgatcgagatggaaacccgtctgagcggccgcgacatcgccctcgaatcgtcgagcgac
gacgacgacgacaagttcgccccgatcgcctacctgtcgtcggaccagaacgagccgacc
aaggtgttggaggccgagcaggtcacccgcctgcagtccgagggactggagacggcgctg
ggcaagctcgatccgcgctcgcgccgcatcgtcgaggcccgctggctggccaacgacgac
ggctccggcgccaccctgcacacgctggccgccgagttcggcgtgtcggccgagcgcatc
cgccagatcgaatcggccgcactgaagaaaatgaagggcgcgctggccgcctacatctaa
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