Rugamonas sp. DEMB1: QC826_25145
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Entry
QC826_25145 CDS
T08988
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rug
Rugamonas sp. DEMB1
Pathway
rug03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QC826_25145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rug03400
]
QC826_25145
Enzymes [BR:
rug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
QC826_25145
DNA repair and recombination proteins [BR:
rug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
QC826_25145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WGG49765
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All DBs
Position
5450475..5451245
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AA seq
256 aa
AA seq
DB search
MPKIISANLNGIRSAAKKGFFTWMAAQDADFVCVQELKAQAPDMSEDFLNPPGYHGNFHY
AEKKGYSGTGIYSRSAPDQVRIGFGSPEFDAEGRYVRCDFGSLTVISVYCPSGSSSPERQ
EAKFRFMDLFLPHLLELRAEGREVVICGDWNIAHHEIDLKNWKGNKKNSGFLPEERAWLT
RVFDEAGYVDVHRGIDKREEQYTWWSNRGQAWAKNVGWRIDYHVATPGIAAQAKAVSIYK
DERFSDHAPLTIDYRL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaatcatttccgccaacctgaacggaatccgctccgccgccaaaaaaggcttc
ttcacctggatggcggcgcaggacgccgacttcgtctgcgtgcaggaattgaaggcccag
gcgcccgacatgagcgaggacttcctcaatccgcccggctaccacggcaacttccactac
gccgagaagaagggctactccggcaccggcatctacagccggagcgcgccggaccaggtg
cggatcggcttcggcagccccgagttcgacgccgagggccgctacgtgcgctgcgacttc
ggctcgctgaccgtgatctcggtgtactgcccgtccggctcctcgtcgccggagcgccag
gaggccaagttccgcttcatggacctgttcctgccgcacctgctggaactgcgcgccgag
ggccgcgaggtggtcatctgcggcgactggaacatcgcccaccacgagatcgacctgaag
aactggaagggcaacaagaagaactccggcttcctgcccgaggagcgcgcctggctgacc
cgcgtgttcgacgaggccggctatgtcgacgtccaccgcggcatcgacaagcgcgaggag
cagtacacctggtggagcaaccgtggccaggcctgggccaagaacgtcggttggcgcatc
gactaccacgtcgccaccccgggcatcgcggcgcaggccaaggcggtgtcgatctacaag
gacgagcgcttctccgaccacgcgccgctgaccatcgactaccgtttgtga
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