Rugamonas sp. DEMB1: QC826_28500
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Entry
QC826_28500 CDS
T08988
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
rug
Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rug03000
]
QC826_28500 (rtcR)
Transcription factors [BR:
rug03000
]
Prokaryotic type
Other transcription factors
Others
QC826_28500 (rtcR)
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Paralog
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GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA
AAA_5
AAA_16
AAA_22
NACHT
AAA_7
AAA_19
AAA_30
AAA_14
MCM
ATPase_2
AAA_2
NB-ARC
IstB_IS21
AAA_33
Motif
Other DBs
NCBI-ProteinID:
WGG50315
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Position
6186847..6188457
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AA seq
536 aa
AA seq
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MQKKRTVVIGFVGTHLDNGKGAARWEKWRPSVALTQHEDMVIDRFDLLYSGKFVALVDQV
TQDIAAVSPETSVVGHDLPIADPWDFENVYGSLFDFSKRYPFDPDKEEYWIHITTGSHVA
QICLFLMTEARYFPGRLLQTSPPRRQAPGDPGSFTLIDLDLSKYDQIAQRFSSEQQDGVA
FLKSGIATRSPRFNAMIDEIEHIAIKSRAPILLMGPTGAGKSFLARRVFELKKSRHQFDG
KFVELNCATLHGDGAGSTLFGHVKGAFTGAATERPGLLRTAHKGLLFLDEIGELGLDEQA
MLLKAVEEKRFLPVGGDHEVQSDFQLIAGTNRDLAKEVLAGRFREDLYARINLWTYELPG
LVDRCEDIEPNIDYLLAQHSAENGQQARINKEARERYMGFAMSSEALWSGNFRDLSASVT
RMATLAEAGRVTDAVVEGEIIRLKRLWHRGTRPAGQDEVALDDLMDGDALAGMDLFDTLQ
LKAVIQVCRQSKSLSDAGRKLYAASRAAKAKPNDADRLKKYLGKFGLNWDQASTRP
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaaacgaacggtcgtcatcggctttgtgggcacccacctcgacaacggcaaa
ggtgcggcccgctgggagaagtggcgtcccagcgtcgcgctgacccagcacgaggacatg
gtcatcgaccgcttcgacttgctctacagtggaaaatttgtcgcgctggtcgaccaggtg
acgcaggatattgccgccgtgtcgccggagacgagcgtggttggccacgacttgccgatc
gccgacccgtgggatttcgagaacgtctacggcagcctgttcgatttttcgaagcgctac
cccttcgacccggacaaggaagagtattggatccacatcaccaccggttcgcatgtggcg
cagatctgcctcttcctcatgaccgaggcgcgctacttccccggccgcctgctacaaacc
tcgccgccacggcgccaggcgccgggcgacccgggcagtttcaccctgatcgatctggac
ctgtccaaatacgaccagatcgcgcaacgcttctccagcgagcagcaggacggcgtcgca
ttcctgaaatccggaattgccacgcgcagtccgcgcttcaacgcgatgatcgacgagatc
gaacacatcgccatcaaatcccgcgcgccgatactgctgatgggcccgaccggcgccggc
aaatccttcctggcgcggcgcgtgttcgagttgaagaagtcgcgccaccagttcgacggc
aagttcgtcgaactcaactgcgccaccctgcacggcgacggcgccggttcgaccctgttc
ggccacgtcaagggcgcgttcaccggcgcggccacggagaggcccggcctactgcgcacc
gcgcacaagggattgttgtttctggacgagataggcgagctcggcctcgacgagcaggcc
atgctgctgaaggcggtcgaggaaaagcgctttctgccggtgggcggcgaccacgaggtg
caaagcgatttccagctgatcgccggcaccaaccgcgacctggcgaaagaggtgctggcc
ggccgcttccgcgaagacctgtacgcgcgtatcaatttatggacctacgagctgccgggc
ctggtcgaccgttgtgaggacatcgaaccgaacatcgactacctgttggcgcaacacagc
gcggagaacggccagcaggcgcgcatcaacaaggaggcgcgcgagcgctacatgggtttc
gcgatgtcgagcgaggcgctatggagcggcaacttccgcgacttgtcagcgtccgtgacg
cgcatggcgacgctggccgaagccggccgcgtcaccgacgctgtcgttgaaggagagatc
attcgcttgaagcgactgtggcatcggggcacgcggccggcgggccaagacgaggtcgcg
ctggacgacttgatggatggcgatgccttggccggcatggacctgttcgacaccttgcag
ctcaaggccgtgatccaggtttgccgtcaatcgaagtcgctgtcggacgccggacgcaag
ctgtatgcggcatcgcgcgcagcgaaagccaaacccaacgacgccgaccgcctcaaaaag
tacttgggcaagttcggcctcaactgggaccaggcgagcacgcgcccatga
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