Rugamonas sp. DEMB1: QC826_29730
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Entry
QC826_29730 CDS
T08988
Symbol
gcvA
Name
(GenBank) transcriptional regulator GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
rug
Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rug03000
]
QC826_29730 (gcvA)
Transcription factors [BR:
rug03000
]
Prokaryotic type
Helix-turn-helix
LysR family
QC826_29730 (gcvA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
DUF6104
HTH_30
Motif
Other DBs
NCBI-ProteinID:
WGG50535
LinkDB
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Position
complement(6446952..6447866)
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AA seq
304 aa
AA seq
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MSETPRLPNFSALRAFEAAARHQNFSRAAEELHLTHGAISHQVRALEEELGLALFVRNGR
HVKVTADGLRFAQVLGRSFAEIAMAAEALRPGSASARRLTVSSIPSFAARWLAPRLGRFI
ELHPEVEVVLQSSGQLQDLARDGVDVGIRFGRGHYPGMQVERLMGDIYFPVVSPHYRGGA
LPATPAELDQACLLRSVEPWAPWLQAAGLALAEPSGGVMFEDLSMLIRSAVDGDGVALVR
RVVAMQELASGQLLRLFELAVPCAEQYYFVSPPAAAHKPQVQAFRAWLLAEVADFQRQLG
GAVT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaccccgcggctgcccaatttttccgccctgcgcgccttcgaggcggcggcg
cggcaccagaatttttcgcgcgcggccgaggagttgcacctgacccatggcgcgatcagc
caccaggtgcgcgcgctggaggaggagctgggcctggcgctgttcgtgcgcaacggccgc
cacgtcaaggtgacggcggacgggctgcgcttcgcccaggtgctgggccgctccttcgcc
gagatcgccatggcggccgaggcgctgcggccgggcagcgccagcgcgcgccggctgacg
gtgtcgtccatcccctcgttcgcggcgcgctggctggcgccgcgcctgggccgcttcatc
gagttgcatcccgaggtggaggtggtgctgcagtcgagcgggcagttgcaggatttggcg
cgcgacggcgtcgacgtcggcatccgcttcggccggggccactatccgggcatgcaggtg
gaacgcctgatgggcgacatctattttccggtggtgagtccccactatcgcggcggcgcc
ctgccggcaacgccggccgagctggaccaggcttgcctgctgcgctcggtggagccgtgg
gcgccgtggttgcaggcggccggcctggcgctggcggagccgtccggcggggtgatgttc
gaggatttgtcgatgctgatacgctcggccgtcgacggcgacggcgtggcgctggtgcgc
cgcgtggtggcgatgcaggagctggcctcgggccaactgctgcgcctgttcgagctggcc
gttccctgcgccgagcaatattacttcgtcagcccgccggcggcggcgcacaagccgcag
gtgcaggccttccgcgcctggctgctggccgaggtggcggacttccagcgccagctcggc
ggcgctgttacatga
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