Rugamonas sp. DEMB1: QC826_30265
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Entry
QC826_30265 CDS
T08988
Name
(GenBank) DEAD/DEAH box helicase
Organism
rug
Rugamonas sp. DEMB1
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
WGG50625
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All DBs
Position
complement(6554366..6558529)
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AA seq
1387 aa
AA seq
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MTDPQLLAEFDALAFNEKMILALLALLGEPTGRTSILDHMRAAGFKDPQERTYSATTLDE
PIRHLERLAFVSVVTGRGYVCNPKLRWPALRAAIGAHTLDQLCHAHDVVVPLRQSWSTHE
PRSYRAGVARLRMALLRGQAPQQVVPLLSFCMASYEAAQLHPVIEILGRPFEAGMLARVH
PLMQDDVLTLLLNNAQREPAGAAQLRGHAEQHVQRRQAAGDEVAPALRLGLAEDAILCGR
LDDAARYLERCDGATALFLASVVRLLRGEHGAAVDGFEAALKALRRESGKRKQLFHGIGG
HLYALALMRGGDAKLAKTAEAYLDAAVRATQNHDSAVYQQLDLLRQVRAGTLQAEAIPTR
AWETTLQAQMFQSLLYYWLSLPQLAQRRLELEELAQQAEAAGYLLLAGQALALLGHLGEP
AQAKRAAALRERLGFADLTQWFERQEAWQRQLTALINLHQPAAPEQSGAVRLAWMLVYDA
RHGLTEVEPREQKRDARGAWSKGRAVGLKRLRFESEQIDYLTPQALRAAEAISVAHRNYH
SSGLAYEVDPQRAAAALVGHPLVFWQEAPDTRVELLAGEPELLIRKRGGNLHLSLQPAIP
DNNSTVVISRETPTRLRVIAIADEHRRIAAIVGDGLIVPEHAEQQVLQAIGSISSLVTVQ
SDIGGAHSDVAQVEADARLHVHLLPYQHGLKMQLLVRPLDGGAYYAPGDGAETLIADAGG
KPAQTRRELNAEREAERQLVGKCTILDEAEQDHGEWLLGQPALCLQLLAELQELDPAGIV
LAWPEGESFRITKKVDSKQLRLAIKSHKDWFAASGELQVDEEQVMDLRTLLELVRSGKGR
FIELGENRFLALAEELHRRLSEVSAYGELNADGVRLHPLAAFALEELADSAGGLKADQAW
REHLARLQSQTEFVPQLPSTLQAELRDYQHEGYDWLARLAHWGVGACLADDMGLGKTLQA
LALILSRAPQGPTLVVAPTSVCMNWISEAARFAPTLNVKLFGAGDRADTLATLQPFDLVV
VSYGLLQLESALFAGVHWQTIVLDEAQAIKNSTTKRSQAVMALRGGFKMVATGTPLENHL
GELWNLFRFINPGLLGTLDQFNLRFAGPIEKAQDHRAEVGARLRLRRLIQPFILRRTKSQ
VLAELPPRTEITLEVDLSAPEMALYESLRRSALEKLAAVEGPAEKKSMQILAEIMKLRRA
CCNPALVAPELGLASSKLAAFAHLLTGLLENGHKVLVFSQFVDHLKLIRHHLEEQDVSYQ
YLDGSTSMAERKSRVDAFQAGTGDVFLISLKAGGVGINLTAADYVIHMDPWWNPAVEDQA
SDRAHRMGQLRPVTIYRLVARHTIEEGIVELHQHKRDLADSLLEGSDTAARLSARDMLDM
LAQGLQR
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacccgcaactgctcgccgaattcgacgccctcgccttcaatgaaaaaatgatc
ctggcgctgctcgccctgctcggcgagccgaccgggcgcaccagcatcctcgaccacatg
cgcgccgccggcttcaaggacccgcaggagcgcacctacagcgccaccacgctcgacgaa
ccgatccgccacctggagcggttggccttcgtcagcgtcgtcaccgggcgcggctacgtc
tgcaaccccaagctgcgctggccggcgctgcgcgccgccatcggcgcccacacgctggac
cagctgtgccacgcgcacgacgtggtggtgccgctgcgacaaagctggagcacgcacgag
ccgcgcagctaccgcgccggcgtggcgcgcctgcgcatggcgctgctgcgcggccaggcg
ccgcagcaggtggtgccgctgctgagtttttgcatggccagctacgaggcggcccagctg
cacccggtgatcgagatcctcggccggcccttcgaggccggcatgctggcgcgggtccac
ccgctgatgcaggacgacgtgctgaccctgttgctcaacaacgcgcagcgcgagccggcc
ggcgcggcccagctgcgcggccacgccgagcagcatgtgcagcggcgccaggcggccggc
gacgaggtggcgccggcgctgcgcctgggcctggccgaggacgccatcctgtgcggccgg
ctggacgacgcggcgcgctacctggaacgctgcgacggcgccacggcgctgttcctcgcc
agcgtggtgcggctgctgcgcggcgagcacggcgccgccgtggacggcttcgaggcggcc
ttgaaggcgctgcggcgcgagtccggcaagcgcaagcagctgttccacggcatcggcggc
cacctgtacgcgctggccctgatgcgcggcggcgacgccaagctggccaagaccgccgag
gcctacctggacgccgccgtgcgcgccacgcagaaccacgacagcgccgtctaccagcag
ctcgacctgctgcgccaggtgcgcgccggcacgctgcaggccgaggccatcccgacccgc
gcctgggagaccacgctgcaggcgcagatgttccaaagcctgctgtactactggctgtcg
ctgccgcaactggcgcagcgccgcctcgagctggaggagctggcgcagcaggccgaggcg
gccggctacctgctgctggccggccaggcgctggccctgctcggccacctgggcgagccg
gcccaggccaagcgcgccgccgcgctgcgcgagcggctcggcttcgccgacctgacccag
tggttcgagcggcaggaggcctggcagcgccagctcaccgcgctgatcaacctgcaccag
ccggccgcgccggaacaaagcggcgccgtgcggctggcctggatgctggtgtacgacgcc
cgccacggcctgaccgaggtcgagccgcgcgagcagaagcgcgacgcgcgcggcgcctgg
agcaagggccgcgccgtcggcctcaagcggctgcgcttcgagtccgagcagatcgactac
ctgacgccgcaggccctgcgcgccgccgaggcgatcagcgtggcgcaccgcaactaccac
tcctccggcctggcctacgaggtcgacccgcagcgcgccgccgccgcgctggtcggccac
ccgctggtgttctggcaggaggcgccggacacccgcgtcgagctgctggccggcgagccg
gaactgctgatccgcaagcgcggcggcaatctgcacctgagcctgcagccggccatcccc
gacaacaactccaccgtcgtcatcagccgcgaaacgccgacccggctgcgcgtgatcgcc
atcgccgacgagcaccgccgcatcgccgccatcgtcggcgacggcctgatcgtgcccgag
cacgccgagcagcaggtgctgcaggcgatcggttcgatctcctcgctggtgacggtgcag
tccgacatcggcggcgcccacagcgacgtggcgcaggtcgaggccgacgcccgcctgcac
gtccacctgctgccctaccagcacggcctgaagatgcagctgctggtgcgtccgctcgac
ggcggcgcctactacgcgccgggcgacggcgccgagaccctgatcgccgacgccggcggc
aagccggcgcagacccggcgcgagctgaacgccgagcgcgaggccgagcgccagctggtc
ggcaagtgtactatcctcgacgaggccgaacaggaccacggcgagtggctgctgggccag
ccggcgctgtgcctgcaactgctggccgagctgcaggagctcgacccggccggcatcgtg
ctggcctggcccgagggcgagagcttccgcatcaccaagaaggtcgacagcaagcagctg
cgcctggccatcaagagccacaaggactggttcgccgccagcggcgagctgcaggtcgac
gaggagcaggtgatggacctgcgcactttgctcgagctggtgcgcagcggcaagggccgc
ttcatcgagctgggcgagaaccgcttcctggcgctggccgaggagctgcaccgccgcctg
tccgaggtgtcggcctacggcgagctgaacgccgacggcgtgcgcctgcacccgctggcc
gccttcgcgctcgaggagctggccgactcggccggcggactgaaggccgaccaggcctgg
cgcgagcacctggcgcgcctgcagtcgcagaccgagttcgtgccgcagctgcccagcacc
ctgcaggccgagctgcgcgactaccagcacgagggctacgactggctggcccgcctggcc
cactggggcgtgggcgcctgcctggccgacgacatgggcctgggcaagaccctgcaggcg
ctggcgctgattttgtcgcgcgcgccgcagggaccgaccctggtggtggcgcccacctcg
gtgtgcatgaactggatcagcgaggcggcccgcttcgcgccgaccctgaacgtcaagctg
ttcggcgccggcgaccgcgccgacacgctggccacgctgcaaccgttcgacctggtggtg
gtcagctacggcctgctgcaactggagtcggcgctgttcgccggcgtgcactggcagacc
atcgtgctcgacgaggcgcaggccatcaagaacagcaccaccaagcgctcgcaggccgtc
atggcgctgcgcggcggcttcaagatggtggccaccggcacgccgctggagaaccacctg
ggcgagctgtggaacctgttccgcttcatcaaccccggcctgctcggcaccctggaccag
ttcaacctgcgcttcgccgggccgatcgagaaggcgcaggaccaccgcgccgaggtcggc
gcgcggctgcgcctgcgccgcctgatccagccgttcatcctgcgccgcaccaagtcgcag
gtgctggccgagctgccgccgcgcaccgaaatcacgctggaggtcgacctgtcggcgccg
gagatggcgctgtacgagtcgctgcgccgcagcgcgctggagaagctggcggcggtcgag
gggccggccgagaagaagtcgatgcagatcctcgccgagatcatgaagctgcgccgcgcc
tgctgcaacccggcgctggtggcgcccgaactgggcctggccagcagcaagctggccgcc
ttcgcccacctgctcaccggcctgctggaaaacggccacaaggtgctggtgttcagccag
ttcgtcgaccacctcaagctgatccgccaccacctcgaggagcaggacgtgtcctaccaa
tacctcgacggcagcaccagcatggccgagcgcaagagccgcgtcgacgccttccaggcc
ggcaccggcgacgtcttcctgatcagcctgaaggcgggcggtgtcggcatcaacctgacg
gcggccgactacgtgatccacatggacccgtggtggaacccggccgtcgaggaccaggcc
tcggaccgcgcccaccgcatgggccagttgcgcccggtgaccatctaccgcctggtggcg
cgccacaccatcgaggagggcatcgtcgagctgcaccagcacaagcgcgacctggccgac
agcctgctcgagggcagcgacacggcggcccgcctgtcggcccgcgacatgctcgacatg
ctggcgcagggcctgcagcgctag
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