Rugamonas sp. DEMB1: QC826_30945
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Entry
QC826_30945 CDS
T08988
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rug
Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rug03400
]
QC826_30945
DNA repair and recombination proteins [BR:
rug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
QC826_30945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
WGG50744
LinkDB
All DBs
Position
6724125..6724556
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AA seq
143 aa
AA seq
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MVDSIDQAARSALMSKIRGKNTRPELIVRKLVYAAGYRYRLHVRKLPGSPDLVFAGRKKV
IFVHGCFWHLHENCRFSHIPKSRVEFWRAKLNGNKLRDARTTDSLRLIGWGVLVVWECEL
HDLAAVLHRISGFLDSSFDVGDH
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atggtggatagcatcgatcaagcggcgcgcagtgcgctgatgagcaaaatacgcggcaag
aacacccgccccgagctcatcgtgcgcaagctggtgtacgccgccggctaccgctatcgg
ctgcacgtgcgcaagctgccgggctcgcccgacctggttttcgcggggcggaagaaggtg
atttttgtgcatggttgcttctggcacctgcatgagaactgccggttttcgcacataccg
aaatctcgggtggaattttggagagcaaaactgaatgggaataagctccgtgatgcgcgg
accactgactcgttacgtctgatcggctggggcgtgcttgttgtatgggagtgtgaacta
catgatttggcggcggtgctgcatcgcatatccggattcttggattcatcttttgatgtg
ggcgatcattga
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