Ruminococcus bovis: E5Z56_00140
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Entry
E5Z56_00140 CDS
T05998
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ruj
Ruminococcus bovis
Pathway
ruj03420
Nucleotide excision repair
ruj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ruj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E5Z56_00140
03430 Mismatch repair
E5Z56_00140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ruj03400
]
E5Z56_00140
Enzymes [BR:
ruj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E5Z56_00140
DNA repair and recombination proteins [BR:
ruj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E5Z56_00140
MMR (mismatch excision repair)
Other MMR factors
E5Z56_00140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Forkhead
Tlp
Motif
Other DBs
NCBI-ProteinID:
QCT05869
UniProt:
A0A4P8XV33
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All DBs
Position
complement(24607..26814)
Genome browser
AA seq
735 aa
AA seq
DB search
MSLTELQKEYSFMNDMQQKAVFKTEGPVLILAGAGSGKTTVLVNRISYILRMGLCRPWQI
LAITFTNKAATELKERICKAVPEQGDDIWAATFHSTCSRILRRYGDRIGYSNHFTVYDSD
DQKRLVKEILKQLNIDEKFLPVKTVLNEISHAKDKMETPEMMEEKAGYDNRLVSIAKVYK
QYTGRLKSSDAMDFDDMLLNTVHLLKTCPDVLEYYQNLFKYIMVDEYQDTNKVQYEFVRL
LAEKSGNICVVGDDDQSIYKFRGATIENILSFENNFPGAEVIRLEQNYRSTQTILDAANE
VIKHNSARKGKTLWTENKKGDKVTFYTAFSERDEAMFIADKILDGVKEGRKFSDFAVLYR
MNAQSNAVEHSLSRAGIPHRIIGGHRFYDREEVRDMVAYLHVINNPHDDIRLRRIINKPK
RAIGATTVEKAANIATNLGDSIYNVIKEADAYPDLSRAAKKLKEFVALIDGFIDAVNSNM
YSLAEIYNLILEHTDYERYIRTEKDKPDERIENIEELRSNIVNFEKEYEENADLTTFLEE
ISLQTDIDNYDADSDTVVMMTLHSAKGLEFPVVFIPGMEEGIFPSNMTIMNPEEMDEERR
LAYVGITRAKEKLYLLRAQDRMLFGSTQHNRPSRFTKEIPEELVDLQGKERKEKVSEDFL
KYGKPKKNFSGFKKTPTTTPKSTTYAVGDAVMHKVFGKGTIVRADKMGNDQMLQIAFDTA
GTKTLMANFCKMEKL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaactgaattacaaaaagagtattcttttatgaatgatatgcagcagaaagct
gtttttaagacagaaggtcctgttcttatccttgcaggtgcaggtagtggtaaaacaaca
gttcttgtaaacagaatcagctatattcttcgtatgggactttgcagaccctggcagata
cttgctatcacttttaccaataaagcagctacagagcttaaagaaagaatctgcaaagca
gtaccggaacaaggtgatgacatctgggcagcaacattccacagtacttgttcaagaatt
ttgcgtagatatggtgacagaataggttattctaaccattttactgtttatgattctgat
gaccaaaaaagacttgtaaaagaaattctaaagcaacttaatattgatgaaaagttttta
cctgtaaaaactgtattaaacgaaatttctcatgctaaggataaaatggaaacacctgaa
atgatggaagaaaaagccggttatgacaaccgtcttgtttctattgctaaggtttataag
cagtatacaggcagacttaagtcctcagatgcaatggactttgacgatatgctattaaat
actgtccatcttctaaagacttgtcctgatgtactggagtattatcagaacctatttaag
tacataatggttgacgaatatcaagataccaacaaagtacagtatgaatttgtaagacta
cttgctgaaaagtcaggcaacatttgtgttgttggtgatgatgaccagagtatttacaaa
ttccgtggtgctactattgagaatattttgtcatttgaaaacaacttcccgggagcagaa
gtaattagacttgaacagaactacagaagtacacagacaatccttgatgcagccaatgaa
gttattaagcataactcagcccgtaaaggtaaaacattatggacagaaaataaaaagggt
gataaggttactttctatactgctttttccgaaagagatgaagcaatgtttattgccgat
aaaattcttgatggcgtaaaagagggaagaaagttctctgactttgcagttctatataga
atgaatgcacagtcaaatgcagtggaacattcactttcaagagcaggtatcccacacaga
attatcggtggccaccgtttctatgacagagaagaagttcgtgatatggtagcatatctt
catgttatcaataaccctcatgatgatataagacttagaagaattatcaataagcctaag
agagcaataggtgcaacaacagttgaaaaagctgctaatattgcaactaacctaggtgat
agtatttataatgttatcaaagaggcagatgcctatcctgacctttcaagagcagctaaa
aagctaaaagaatttgttgcattgattgatggtttcattgatgcagtaaatagcaatatg
tatagtctagctgaaatctataaccttatcctagagcatactgattatgaaagatatatc
agaacagaaaaagataagccggatgaaagaattgaaaatatagaggaacttcgttctaat
attgttaatttcgaaaaggaatatgaagaaaatgctgaccttacaacattcctagaagaa
atttctctacaaacagatattgataactatgatgccgactccgatacagtagtaatgatg
acacttcatagtgcaaagggtcttgaattccctgtagtatttattccgggtatggaagag
ggaattttcccatcaaatatgacaattatgaatccggaagaaatggatgaagaacgcaga
cttgcatatgtaggtatcacaagagcaaaagaaaaactttacctactgagggctcaagac
agaatgttattcggttcaactcagcataaccgaccatcaagatttactaaggaaattcct
gaagaattagttgatttacaaggaaaggaaagaaaagaaaaagtaagcgaagacttcttg
aaatatggcaaacctaagaagaacttctcaggctttaagaaaacacctacaaccacccct
aagtcaactacatatgcagtaggggatgcagtaatgcataaagttttcggtaagggtaca
atcgtaagagcagacaaaatgggtaacgaccaaatgttgcaaattgcctttgatactgcc
ggtacaaaaaccctaatggcaaacttctgtaaaatggaaaaactttaa
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