Ruminococcus bovis: E5Z56_04505
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Entry
E5Z56_04505 CDS
T05998
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ruj
Ruminococcus bovis
Brite
KEGG Orthology (KO) [BR:
ruj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ruj03016
]
E5Z56_04505 (truB)
Enzymes [BR:
ruj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E5Z56_04505 (truB)
Transfer RNA biogenesis [BR:
ruj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E5Z56_04505 (truB)
Prokaryotic type
E5Z56_04505 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
JmjN
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QCT06669
UniProt:
A0A4P8XX02
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All DBs
Position
939526..940419
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AA seq
297 aa
AA seq
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MNGVIVINKPMDFTSFDVVAVMRKALGIKKIGHLGTLDPNATGVLPLVVGNGTKAQDLIT
NHDKGYVATFQFGKKTDTLDIWGKVLKEEKTSFTTEEVKEKLKDFQGEIYQLPPMYSAIQ
INGQRLYDLARAGKTVEREKRKVTVYSIELLDFDEENQSGKLEIKCSKGTYIRTIIDDLG
ESLGSCAVMTSLIRTEACGFTLEDAIDLQRARELEDFTPYIKSVESLFMNYGYVKITEPQ
ARRFSNGGALDKNRTYLEKMQPKEDTILRVRDNNNQFIGLGIVKGDELKIYKLFKTN
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtgtaattgtaataaacaagccaatggactttacttcatttgatgttgtggca
gtaatgagaaaagcccttggcattaagaaaatcggtcatttaggtacacttgaccctaat
gctacaggtgtacttcctctagttgtaggaaacggcacaaaggctcaggacttaattacc
aatcacgataaaggctatgtggctacctttcaatttggaaagaaaaccgataccctagac
atttggggtaaggtactaaaggaagaaaaaacctctttcactacagaggaagttaaggaa
aaactaaaagattttcaaggcgaaatctatcagctaccacctatgtactcagctattcag
ataaacggtcagagactttatgacttagcaagagcaggtaaaactgttgaaagagaaaaa
agaaaagtaacagtttattccatagaacttcttgattttgatgaagaaaatcaaagtggt
aagttggaaatcaagtgtagcaaaggcacatacataaggacaattattgatgaccttggt
gaaagtttaggttcttgtgcagttatgacttcacttattagaaccgaggcttgtggcttt
acccttgaagatgcaattgacttgcagagagctagggaactagaggacttcacaccgtac
attaaaagtgtggaaagtctgtttatgaactacggttatgtgaaaattacagaaccacag
gcaagaagattctctaacggtggtgcattggataagaatagaacttaccttgaaaaaatg
caacctaaagaggacacaatcctaagagttagggataacaataatcagtttatcggctta
ggtatcgttaaaggtgacgaactaaaaatttataaacttttcaaaacaaattag
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