KEGG   Ruminococcus bovis: E5Z56_05615
Entry
E5Z56_05615       CDS       T05998                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ruj  Ruminococcus bovis
Brite
KEGG Orthology (KO) [BR:ruj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ruj02048]
    E5Z56_05615
Enzymes [BR:ruj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     E5Z56_05615
Prokaryotic defense system [BR:ruj02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   E5Z56_05615
SSDB
Motif
Pfam: SWI2_SNF2 ResIII HSDR_N T1R_D3-like DEAD
Other DBs
NCBI-ProteinID: QCT06873
UniProt: A0A4V1G538
LinkDB
Position
1193670..1196726
AA seq 1018 aa
MTLETKERRFEQDIETFFLSDEGGYVSLKSSQFDVDKCICMDVLCRFIEKTQPKAWAKYL
KYYGENAQEKLYFRLEKCISEQGLIYVLRHGIEDLGIKLKVCYFKPETALNDLDVERYEA
NILGCTRQFRYSPHNTNTIDMVLSVNGIPVVSIELKNQLTGQDYQCAIKQYKNDRSSKEF
CFRLDHRFLVYFAVDLYEVWMTTQLKDGSTYFMPFNQGSNGAGVSGSAGNPEYPDGYVTH
YLWEEVLQRDSLMDILYRFVSHVKEKDVDTGKTKEKLLFPRYHQYDVVRKVLADVKVNGS
GNNYLIQHSAGSGKSNSIAWIAYRLASIHDANDEGIFDSVIVVTNRVVLDGQLQDTINSF
EHKVGLVEAIDDKKNSHSLAEAINDGKKIIISTVQKFLFGYKDMNSYTGKKFAIIIDEAH
QGQSGESARMLRRSLIDLGVAIKDYAEEQEINIEDVDLTDEYINAVIGQGRHANQSFFAF
TATPKGETIEVFGTPYTKPDGTPGKRPFHVYSMKQAIDEGFILDVLQDYTTIREAFKLVK
VSEDNPELIEGAASKALFKYYKKHGYTITQKTEMIMSNFLANGRFQIGGKGKAMVVADSR
ANAVRYYLAIKQYLKDNPVVSAGCDVMIAFSGEITLEEMPTEKPFTEATMNLDENGKYIT
TDKKFRKVFHSNQYNILVVANKYQTGFDEPLLHSMYIDKKLKSVAAVQTLSRLNRTCFGK
TSTFVLDFENTEEEIKKAFQPFYEESSMEGETDLNAVYDYRNKLHDYMLFNYDDVEEFNN
FMSGQSGKGQNAAALGQLAGMFRPVIDRYRELSEDDQYDVRDYLRKFTRTYSYVTQIVRL
HDKDLFAEYLYTSNLLRLLPKSGKDIVDIDDKVKLEYANLKETHTGAIILDEKKVVWTPS
GTSEPKKPNKKKDTLQSIIDKVNERFDGQFTEADRVIIEGIYRMFMDDKDVKKFKKYAND
NSTEMFVNSLFPDKFKEIVTQCFLDNNESFQKLFNDPEFYQKVQDVMAKELYKTLRKD
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgaccttggaaaccaaagaaagacgctttgaacaggatatcgagacgttcttcctctcc
gatgagggcggttatgtttcgctgaaaagcagtcagttcgatgttgacaagtgcatctgt
atggacgtgctgtgcaggttcatcgaaaagacacagccgaaagcgtgggcgaagtatctc
aaatactacggcgagaacgcacaggaaaagctctatttccgccttgaaaagtgcatcagc
gaacagggcttgatctatgttcttcgccacggtatcgaagacctcggcatcaagctgaaa
gtctgctacttcaagcccgaaactgccctcaatgatctcgatgtggagcgctatgaggcg
aatatcctcggctgcacaagacaattccgctattccccacacaatacaaataccattgat
atggtactatccgtgaatggtattcccgttgtatctattgaactgaaaaaccaacttaca
gggcaagattatcaatgtgcaatcaagcaatataaaaacgatcgtagcagtaaggagttt
tgtttccgacttgaccatcgcttcctcgtatattttgctgttgacctttatgaagtctgg
atgacaacgcaactcaaagacggaagcacctattttatgccgttcaatcaaggctcaaac
ggagctggcgttagtggtagcgcaggcaatcctgaataccctgatggatatgtaacacat
tatctttgggaagaagtcttgcaacgggattcacttatggatatcctctacagatttgtt
tctcacgttaaggaaaaggatgtagatacaggaaaaacaaaagagaaactgctgttccca
cgttatcatcaatatgatgtggtgcgtaaagttcttgccgatgtaaaggttaatggttct
ggaaacaattatcttatccagcacagtgccggttcgggcaaatcaaattctattgcgtgg
attgcctatcgtctggcttctattcacgacgcaaatgacgaagggatatttgattccgtt
atcgtagtaacaaaccgtgtcgtacttgacgggcagcttcaggacacaatcaacagcttt
gagcacaaggttggtcttgtggaagcgatagatgataaaaagaattcccacagccttgca
gaagcaattaacgatggtaaaaaaataattatcagtacggttcagaaattcttgtttggc
tacaaggatatgaatagttatacgggtaaaaagtttgcaatcatcattgatgaagcacat
cagggacaaagcggcgaaagtgcaagaatgctccgcaggagcctgatagatcttggtgta
gctatcaaagattatgccgaggagcaggaaatcaacatagaagatgttgatctgacagat
gagtatataaacgcagtaatcggtcagggtagacacgcaaatcagtctttcttcgctttt
acagcaacgccaaaaggtgaaactattgaggttttcggaacgccttacaccaaacctgac
ggtactccgggtaaacgtccattccacgtctattctatgaagcaagctatagatgaagga
tttatccttgatgtattacaggactataccactatccgtgaagcgttcaagcttgtaaaa
gtatccgaggataatcccgaactaattgaaggagcggcttcaaaagcactattcaaatat
tataagaagcacggatatacaattacgcaaaaaactgaaatgattatgtctaatttcctt
gctaacggcagatttcaaattggagggaaaggtaaggcaatggtggttgcagatagccgt
gcaaatgcggttcgttattatcttgcaatcaagcaatatctgaaagacaatccagtggtt
tcagcaggatgtgatgttatgattgctttttcaggagaaatcacgcttgaagaaatgcca
acggaaaagccttttacagaagcgactatgaaccttgatgaaaacggaaagtatatcaca
actgataaaaagttccgaaaagttttccacagcaatcaatacaatatccttgttgttgct
aacaagtaccaaacaggttttgacgaaccgctgttacattcaatgtacattgataaaaaa
ttaaaaagtgtcgcagcagtacagacgctctctcgcttgaatcgaacttgttttggaaag
acaagcacttttgtccttgattttgagaacaccgaagaggagatcaagaaggcgttccaa
ccgttttatgaggaatcttctatggagggtgaaacagacctgaatgctgtttatgattac
agaaataagctgcacgattatatgctgttcaactatgatgatgtagaagaattcaacaac
tttatgtcaggacagtccggaaaaggtcaaaatgctgccgctctcggtcaacttgctggt
atgtttagacctgttatagacagatatagagagctttctgaagatgaccaatatgatgtt
cgtgattacctccgtaagttcacaaggacttatagttatgtcactcaaattgtcagactt
cacgacaaagacctttttgctgagtatctctacacttcaaaccttctgaggttattgcct
aaatcgggaaaagacatcgttgatatagacgataaggtcaaacttgaatatgcaaatctt
aaagaaacgcatacaggcgcaataatacttgatgaaaagaaagttgtctggactccaagc
gggacatcggaacctaaaaaacctaacaagaaaaaggatacattgcagagtatcatagat
aaagtgaacgagcgctttgacggtcaattcaccgaagcagacagggttataattgagggc
atatatcgaatgtttatggacgataaggacgttaaaaagttcaaaaaatatgccaacgat
aatagcactgaaatgtttgtgaattcccttttccctgataaattcaaggagattgttaca
cagtgtttccttgataacaacgaatctttccagaaactgtttaacgatcctgaattctat
cagaaagtacaggacgttatggcaaaagaactatataagacactgagaaaagattaa

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