Ruminococcus bovis: E5Z56_06050
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Entry
E5Z56_06050 CDS
T05998
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ruj
Ruminococcus bovis
Pathway
ruj00521
Streptomycin biosynthesis
ruj00523
Polyketide sugar unit biosynthesis
ruj00541
Biosynthesis of various nucleotide sugars
ruj01100
Metabolic pathways
ruj01110
Biosynthesis of secondary metabolites
ruj01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ruj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E5Z56_06050 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E5Z56_06050 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E5Z56_06050 (rfbC)
Enzymes [BR:
ruj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
E5Z56_06050 (rfbC)
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Gene cluster
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QCT06950
UniProt:
A0A4P8XY10
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All DBs
Position
1291063..1291665
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AA seq
200 aa
AA seq
DB search
MGQIKVTKCPIEGLYIIEPAVHGDNRGYFMETYNQNDMHEAGLDMVFVQDNQSMSTKGVL
RGLHFQKQYPQGKLVRAIKGRVFDVAVDLRSGSETYGKWYGVELTEENKKQFYISEGFAH
GFLVLSDEAEFCYKVTDFYHPGDEGGLAWNDPEIGIEWPELEGNYDGTCEVGNYHLKDGT
KLNLSDKDQKWLGLKDTFKF
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgggacagattaaagtaacaaagtgtccaatcgaaggactatatattattgaacctgca
gtacatggtgacaaccgtggttattttatggaaacatataaccagaacgatatgcacgaa
gcaggtcttgatatggtatttgtacaagataaccaaagtatgagtacaaagggtgtacta
aggggtcttcacttccaaaagcagtacccacaaggtaaacttgtaagagctattaagggt
agagtttttgatgtggcagttgacttgcgttcaggtagcgaaacatacggtaagtggtat
ggtgttgaactaactgaagaaaataaaaagcagttctatatttcagaaggttttgctcat
ggtttcctagttcttagtgatgaagcagaattttgttacaaggttaccgacttttatcat
ccgggagatgaaggtggtcttgcttggaatgaccctgaaattggtattgaatggcctgaa
cttgaaggcaactatgacggtacttgtgaagtaggtaattatcacctaaaagacggtaca
aagctaaacctaagcgataaagaccaaaagtggttaggtttaaaggatacatttaagttt
taa
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