Ruminococcus bovis: E5Z56_06210
Help
Entry
E5Z56_06210 CDS
T05998
Name
(GenBank) PASTA domain-containing protein
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
ruj
Ruminococcus bovis
Pathway
ruj00550
Peptidoglycan biosynthesis
ruj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ruj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E5Z56_06210
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ruj01011
]
E5Z56_06210
Peptidoglycan biosynthesis and degradation proteins [BR:
ruj01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
E5Z56_06210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QCT06980
UniProt:
A0A4P8XY40
LinkDB
All DBs
Position
1320335..1322614
Genome browser
AA seq
759 aa
AA seq
DB search
MKEIRKEQDQLAKNVKGVNQKLRHRTMILLAIILVIGFGAATCRLAFLQVVKGESLSQKA
VEQQLHDTEISAKRGTIYDRTGKVLAQSASVWRVVMAPANFKTDEQREYVAKNLSKILDL
DYDEVLKETKENSYYVSVKRKIETKERNKILKLQDTLSEKYQLENVIQLLDDYKRYYPYN
ELASSVIGFTGEDDQGLEGLEYQYNKYLSGTSGRLISARNSQGVDMPFAYEQSVDAKDGN
NLVLTIDETVQAVVEKYMQQNIITNKVYNRGCAIMMDVTNGEIIAMATVGGYDLNEPYTI
ADETKQKEIKAITDKKKKNKAYNEALAEQWRNKAISDTYYPGSVFKIITSAMALEEGVVN
ADTSTFNCTGSMQVSDRLIHCHDWNGHGTQTFEQAIINSCNPAFMQIGAKVGAAKFWEYY
QAFGYSELTGIDLPGESDDQFFTPDGSMGVVDLAVASFGQGFSITPIQMITAVSAVANGG
NLVQPHVVKQIQDSNGNVVQNYDTKIKRKVVSSSVSKTLNTILQHNSEQGGVKCGYVAGY
RVAGKTGTSEKLVDSNGDGVEDYIASFLGYAPADNPKYAMLMFFDTPTGDNYYGSVVAAP
VFSQIMEEVLPYLEVETEYTDSEREDLDVIADQYVGLSTEDAQQKISDAGLTPVVKGSGS
KVIAQMPESNSTVPKGGTVVLYTDKSSAKETVEVPNLLDMSLSDVNSIASQYGLNVSVKG
TSSTSGDGISTKQSIAEGTKVSEGTVITVTFSPQSGIAE
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagataagaaaggagcaagaccagttggctaagaatgtaaaaggcgtaaatcaa
aagttacgacatagaacaatgattcttttggctattattttggttattggttttggtgct
gctacttgtagacttgcatttttgcaagtggttaagggagaaagtttaagccaaaaggct
gttgaacaacagttacatgatactgagatttcagcaaaacgaggaactatctatgataga
accggtaaagtattagcccagagtgcttcggtatggcgagttgttatggctcctgctaac
ttcaaaactgatgaacagagagagtatgtagctaaaaatctttcaaaaattcttgatttg
gattatgatgaagttttaaaggaaactaaagaaaattcatattatgttagtgttaagaga
aaaatagaaacaaaagaaagaaataaaattttaaaattacaagatactttaagtgaaaaa
tatcaattggaaaatgttattcagctacttgatgactacaagagatattatccttataac
gaacttgcttcttcagtaatcggttttaccggtgaagacgaccaaggtcttgaaggtctt
gagtatcagtacaataagtatttgtcaggtacaagtggcagactaatttcagcacgaaat
tcacaaggtgttgatatgccgtttgcctatgaacaaagtgttgatgctaaagacggtaac
aacctagttcttactattgatgaaacagttcaagctgttgttgaaaagtatatgcaacag
aacatcataactaataaggtttataaccgtggttgtgctattatgatggatgttacaaat
ggtgaaattattgctatggctacagtcggtggctatgaccttaacgaaccttatacaata
gccgatgaaacaaagcaaaaagaaatcaaagctattacagataaaaagaaaaagaacaaa
gcctataatgaggctttagctgaacagtggcgtaataaagctatttccgacacttattat
ccgggttcggtatttaagattattacttctgctatggcacttgaagaaggtgttgttaat
gcagatacaagtactttcaactgtaccggttctatgcaggtaagtgatagacttatccac
tgtcatgactggaacggtcatggtacacagacttttgaacaagcaattatcaattcttgt
aaccctgcatttatgcagattggtgcaaaagtaggtgcagcaaagttctgggaatactat
caggcatttggttattccgaattaacaggtattgacctaccgggtgaaagtgacgaccag
ttctttacaccggacggttcaatgggtgttgttgaccttgcagttgcttctttcggtcaa
ggtttctcaattactccaattcagatgattactgccgtatcagcagttgcaaacggtggt
aacttggttcaaccacatgttgtaaagcaaattcaggacagcaacggtaatgttgtacaa
aactatgatacaaagattaagagaaaagttgtatcaagcagcgtatctaaaacattaaac
acaattctacaacacaactcagaacagggcggtgtaaagtgtggttatgttgcaggttac
agagtagccggtaaaacaggtacatcagaaaaattggtagatagcaatggtgatggtgta
gaagattacattgcgtctttcctaggttatgctcctgcagataacccaaaatatgcaatg
ctaatgttctttgatactcctacaggtgataactactacggttctgttgtagcagcacct
gtattctcacagattatggaagaagttttaccttacttagaggttgaaacagaatataca
gatagcgaaagagaagacttagatgttattgccgatcagtatgttggtctatcaacagaa
gatgcacaacaaaagatttctgatgccggacttacaccggtagttaagggttcaggtagc
aaggttattgctcaaatgccggaatcaaattctactgtaccaaagggtggaacagttgtt
ctttataccgacaaatcttcggcaaaagaaacggtagaagtacctaacttacttgatatg
agtttaagtgatgtaaacagtattgcttctcagtatggactgaatgtatctgttaagggt
acttcaagtacaagtggtgacggtatctctacaaagcaaagtatagctgagggtactaag
gttagtgaaggtacagttattacagttaccttctcgccacaaagtggtattgcagaataa
DBGET
integrated database retrieval system
