Ruminococcus bovis: E5Z56_09170
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Entry
E5Z56_09170 CDS
T05998
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ruj
Ruminococcus bovis
Pathway
ruj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ruj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
E5Z56_09170 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ruj03400
]
E5Z56_09170 (xseB)
Enzymes [BR:
ruj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
E5Z56_09170 (xseB)
DNA repair and recombination proteins [BR:
ruj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
E5Z56_09170 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
MscS_porin
DUF1110
TACC_C
Osmo_CC
T3SSipB
Spc7
Fez1
Motif
Other DBs
NCBI-ProteinID:
QCT07514
UniProt:
A0A4P8XYB7
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All DBs
Position
1945845..1946078
Genome browser
AA seq
77 aa
AA seq
DB search
MRYNMSSELTIEELTAKLKSQLAKLEDNSIPLNEAMEVYREAAITLEQCYDSLDKAKGHL
SDINEEIDKLRMKRDEL
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgaggtataatatgagtagtgaactaacaatagaagaattaactgctaaattaaaatcc
caacttgctaaactagaggataattctatcccactaaatgaagcaatggaagtatataga
gaggcagcaattacacttgaacagtgttatgattctcttgataaagcaaaaggtcacctt
tccgatattaatgaagaaattgacaaattgcgtatgaaacgagatgaactgtaa
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