Ruminococcus bovis: E5Z56_10020
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Entry
E5Z56_10020 CDS
T05998
Name
(GenBank) topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ruj
Ruminococcus bovis
Brite
KEGG Orthology (KO) [BR:
ruj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ruj03032
]
E5Z56_10020
03400 DNA repair and recombination proteins [BR:
ruj03400
]
E5Z56_10020
Enzymes [BR:
ruj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E5Z56_10020
DNA replication proteins [BR:
ruj03032
]
Prokaryotic type
DNA Topoisomerases
E5Z56_10020
DNA repair and recombination proteins [BR:
ruj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E5Z56_10020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
GP24_25
ALN_composite
Motif
Other DBs
NCBI-ProteinID:
QCT07670
UniProt:
A0A4P8XZV2
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All DBs
Position
2126801..2129041
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AA seq
746 aa
AA seq
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MARKKKEPKAPQLPKIDGVIDGAGEVVEQKIASTIEENYMPYAMSVIMSRAIPEIDGFKP
SHRKLLYTMYKMGLLTGKRTKSANIVGATMKLNPHGDSAIYDTMVRLSRGYEALLHPYVD
SKGNFGKFYSRDMAWAASRYTEAKLDPICNELFKDIDKDTVDFVDNYDNTMKEPSLLPAT
FPSVLVNANTGIAVGMASNICSFNLREVCETTAALIRDKDHDIMSTLPAPDFIGGGQIIY
DESAIKKIYETGRGGIKVRAKYQYDKANNCIDIFSIPPSTSCEVIIEKIIDLSKQGKVKE
VADIRDETGLDGLKITIDLKRGTDPEKLMMKLFKLTTLQDSFSCNFNVLIAGVPRVMGVR
ELLNEWIAFRVECVRRRTYFDLNKKQEKLHLLKGLKAILLDIDKAVKIVRETEEESEVVP
NLMIGFGIDETQAEYVAEIKLRHLNKEYILKRIEEIESLEKDIAELEAILASKQRVKTII
VKELKNVADKYGKDRVSELLYNVDESNESYVEEVPDYPVNLFFSKEGYFKKITPQSLRMS
SEQKLKEGDMMIQHYESTNTAELLFFTNKCQVYKSKASDFDDTKASVLGDYVPAKLQMDE
GEVPLKMFVTKDYNGMFVFAFENGKLAKVPMNAYYTKTNRKKLVSAYSDKSPLSDVMWLD
EDKELMLTSSGGRVLLIHTGVINLKNTKNTQGVAVMRMKKGQYLEKLEEYTDGLFSKPSR
YRTKTLPALGAFLTEEDSGNEQLSIL
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagaaagaagaaagagccaaaagctcctcaattacctaagattgacggtgtaatt
gacggtgcaggtgaagtagtagagcaaaaaattgcttcaactattgaagaaaactatatg
ccttatgctatgagtgttattatgtccagagcaattcctgaaattgacggatttaaacca
tctcatagaaagctactttacacaatgtacaaaatgggacttttaaccggtaagagaaca
aagtcagccaatattgttggtgcaacaatgaaacttaatcctcatggtgactcagctatc
tatgatacaatggttagactgtcaagaggttatgaagcacttttacatccatatgttgac
tcaaagggtaacttcggtaagttttacagtagagatatggcatgggctgcatcaagatat
actgaggcaaaacttgacccaatctgtaatgaactttttaaggatattgataaagataca
gttgactttgtggataactatgataatacaatgaaagagccttcacttttaccggcaact
ttcccatctgtacttgttaatgcaaatacaggtattgccgtaggtatggcgtctaacatt
tgttcatttaacttgcgtgaagtttgtgaaactacagcagcacttattagagataaagac
catgacattatgtcaacattacctgcacctgactttataggtggtggacagattatctat
gacgaaagtgctattaagaagatttatgaaaccggtcgtggtggtatcaaggttagagca
aagtatcagtatgataaagcaaataactgtattgatattttctcaattccaccatcaact
tcttgtgaagtaattattgaaaaaattattgatttgtctaagcaaggcaaagtaaaagaa
gttgccgatattcgtgatgaaacaggtcttgacggtctaaaaatcacaatcgacctaaag
cgtggtactgaccctgaaaagctaatgatgaagttatttaaacttacaacattacaagat
agttttagttgtaactttaatgttctgattgccggtgtaccaagagtaatgggtgtcaga
gaacttcttaacgaatggatagcatttagagttgaatgtgtaagaagaagaacatatttt
gatttaaacaaaaagcaagagaaacttcatcttctaaaaggtctaaaggcaattttactt
gatattgataaagcagtaaaaattgtcagagaaactgaagaagaaagtgaagttgtacct
aacttaatgataggctttggtattgatgaaactcaggctgaatatgttgcagaaattaag
ctaagacatttaaataaagaatatatccttaagagaattgaagaaatcgaaagtcttgaa
aaggatattgcagagctggaggcaatcctcgcaagtaagcaaagagtaaagactattata
gttaaggaacttaagaatgttgccgataaatacggcaaagacagagtttccgaattacta
tataatgttgatgaaagtaatgagtcatatgttgaagaagtaccggattatccggtaaac
ctattctttagtaaagagggttattttaagaaaattactcctcagtcacttcgtatgagc
agtgaacaaaagctaaaggaaggggatatgatgattcagcattatgagtcaaccaatact
gctgaacttttattcttcactaataagtgtcaagtttataagagtaaagcctctgacttt
gatgatacaaaggctagtgtactgggggattatgtaccggctaaacttcaaatggatgag
ggagaagtcccactaaaaatgtttgttacaaaggactacaacggtatgtttgtatttgca
tttgaaaatggtaaacttgcaaaagtgcctatgaatgcttattatacaaagacaaaccgt
aagaaacttgttagtgcttattccgataagtcaccactttctgatgtaatgtggcttgat
gaagataaagaattaatgttaacctcatcaggtggcagagttctgcttatccatacaggt
gtaataaacttaaagaatactaagaatactcaaggtgtcgctgtaatgcgaatgaaaaaa
ggtcagtaccttgaaaaactagaagaatataccgatggtttattctcaaaaccatcacga
tacagaaccaaaacactacctgctttaggtgcatttctaactgaagaagatagtggcaac
gaacaactttctattttataa
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